Atomistry » Calcium » PDB 7pod-7qfy » 7ppo
Atomistry »
  Calcium »
    PDB 7pod-7qfy »
      7ppo »

Calcium in PDB 7ppo: Structure of Sidj/Cam Bound to Sdea in Pre-Glutamylation State

Enzymatic activity of Structure of Sidj/Cam Bound to Sdea in Pre-Glutamylation State

All present enzymatic activity of Structure of Sidj/Cam Bound to Sdea in Pre-Glutamylation State:
2.4.2.31;

Other elements in 7ppo:

The structure of Structure of Sidj/Cam Bound to Sdea in Pre-Glutamylation State also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of Sidj/Cam Bound to Sdea in Pre-Glutamylation State (pdb code 7ppo). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of Sidj/Cam Bound to Sdea in Pre-Glutamylation State, PDB code: 7ppo:

Calcium binding site 1 out of 1 in 7ppo

Go back to Calcium Binding Sites List in 7ppo
Calcium binding site 1 out of 1 in the Structure of Sidj/Cam Bound to Sdea in Pre-Glutamylation State


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Sidj/Cam Bound to Sdea in Pre-Glutamylation State within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca201

b:46.5
occ:1.00
O B:THR27 2.3 41.7 1.0
OD1 B:ASP23 2.4 36.7 1.0
OD1 B:ASP25 2.4 34.6 1.0
OD1 B:ASP21 2.7 37.1 1.0
CG B:ASP23 3.1 36.7 1.0
OD2 B:ASP23 3.2 36.7 1.0
CG B:ASP25 3.5 34.6 1.0
C B:THR27 3.5 41.7 1.0
CG B:ASP21 3.8 37.1 1.0
OD2 B:ASP25 3.8 34.6 1.0
OG1 B:THR27 3.8 41.7 1.0
OD2 B:ASP21 4.4 37.1 1.0
CA B:THR27 4.4 41.7 1.0
N B:THR27 4.4 41.7 1.0
N B:ILE28 4.4 48.9 1.0
CA B:ILE28 4.5 48.9 1.0
CB B:ASP23 4.6 36.7 1.0
CB B:THR27 4.6 41.7 1.0
N B:ASP23 4.6 36.7 1.0
N B:ASP25 4.7 34.6 1.0
CB B:ASP25 4.8 34.6 1.0
CB B:ASP21 4.9 37.1 1.0
OG1 B:THR29 4.9 58.5 1.0
CA B:ASP21 4.9 37.1 1.0
N B:LYS22 5.0 38.6 1.0
N B:THR29 5.0 58.5 1.0

Reference:

M.Adams, R.Sharma, T.Colby, F.Weis, I.Matic, S.Bhogaraju. Structural Basis For Protein Glutamylation By the Legionella Pseudokinase Sidj To Be Published.
Page generated: Fri Jul 19 03:12:23 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy