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Calcium in PDB 7ppo: Structure of Sidj/Cam Bound to Sdea in Pre-Glutamylation State

Enzymatic activity of Structure of Sidj/Cam Bound to Sdea in Pre-Glutamylation State

All present enzymatic activity of Structure of Sidj/Cam Bound to Sdea in Pre-Glutamylation State:
2.4.2.31;

Other elements in 7ppo:

The structure of Structure of Sidj/Cam Bound to Sdea in Pre-Glutamylation State also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of Sidj/Cam Bound to Sdea in Pre-Glutamylation State (pdb code 7ppo). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of Sidj/Cam Bound to Sdea in Pre-Glutamylation State, PDB code: 7ppo:

Calcium binding site 1 out of 1 in 7ppo

Go back to Calcium Binding Sites List in 7ppo
Calcium binding site 1 out of 1 in the Structure of Sidj/Cam Bound to Sdea in Pre-Glutamylation State


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Sidj/Cam Bound to Sdea in Pre-Glutamylation State within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ca201

b:46.5
occ:1.00
O B:THR27 2.3 41.7 1.0
OD1 B:ASP23 2.4 36.7 1.0
OD1 B:ASP25 2.4 34.6 1.0
OD1 B:ASP21 2.7 37.1 1.0
CG B:ASP23 3.1 36.7 1.0
OD2 B:ASP23 3.2 36.7 1.0
CG B:ASP25 3.5 34.6 1.0
C B:THR27 3.5 41.7 1.0
CG B:ASP21 3.8 37.1 1.0
OD2 B:ASP25 3.8 34.6 1.0
OG1 B:THR27 3.8 41.7 1.0
OD2 B:ASP21 4.4 37.1 1.0
CA B:THR27 4.4 41.7 1.0
N B:THR27 4.4 41.7 1.0
N B:ILE28 4.4 48.9 1.0
CA B:ILE28 4.5 48.9 1.0
CB B:ASP23 4.6 36.7 1.0
CB B:THR27 4.6 41.7 1.0
N B:ASP23 4.6 36.7 1.0
N B:ASP25 4.7 34.6 1.0
CB B:ASP25 4.8 34.6 1.0
CB B:ASP21 4.9 37.1 1.0
OG1 B:THR29 4.9 58.5 1.0
CA B:ASP21 4.9 37.1 1.0
N B:LYS22 5.0 38.6 1.0
N B:THR29 5.0 58.5 1.0

Reference:

M.Adams, R.Sharma, T.Colby, F.Weis, I.Matic, S.Bhogaraju. Structural Basis For Protein Glutamylation By the Legionella Pseudokinase Sidj To Be Published.
Page generated: Fri Jul 19 03:12:23 2024

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