Calcium in PDB 7s14: Crystal Structure of Putative Nad(P)H-Flavin Oxidoreductase From Haemophilus Influenzae 86-028NP

Protein crystallography data

The structure of Crystal Structure of Putative Nad(P)H-Flavin Oxidoreductase From Haemophilus Influenzae 86-028NP, PDB code: 7s14 was solved by Y.Kim, N.Maltseva, M.Endres, T.Crofts, A.Joachimiak, Center For Structuralgenomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.47 / 1.65
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 56.833, 54.779, 134.446, 90, 90.04, 90
R / Rfree (%) 15.2 / 19.1

Other elements in 7s14:

The structure of Crystal Structure of Putative Nad(P)H-Flavin Oxidoreductase From Haemophilus Influenzae 86-028NP also contains other interesting chemical elements:

Potassium (K) 2 atoms
Chlorine (Cl) 3 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Putative Nad(P)H-Flavin Oxidoreductase From Haemophilus Influenzae 86-028NP (pdb code 7s14). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of Putative Nad(P)H-Flavin Oxidoreductase From Haemophilus Influenzae 86-028NP, PDB code: 7s14:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 7s14

Go back to Calcium Binding Sites List in 7s14
Calcium binding site 1 out of 2 in the Crystal Structure of Putative Nad(P)H-Flavin Oxidoreductase From Haemophilus Influenzae 86-028NP


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Putative Nad(P)H-Flavin Oxidoreductase From Haemophilus Influenzae 86-028NP within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca306

b:18.1
occ:1.00
O B:ALA0 2.3 30.1 1.0
OE2 A:GLU7 2.3 25.0 1.0
OE1 A:GLU11 2.5 19.3 1.0
OE2 A:GLU11 2.7 20.8 1.0
CD A:GLU11 2.9 19.0 1.0
CD A:GLU7 3.5 23.9 1.0
C B:ALA0 3.5 31.9 1.0
CG A:GLU7 4.0 19.9 1.0
O B:HOH416 4.3 20.6 1.0
CA B:ALA0 4.4 33.3 1.0
CG A:GLU11 4.4 18.6 1.0
N B:MSE1 4.5 29.6 1.0
OE1 A:GLU7 4.5 27.8 1.0
CA B:MSE1 4.6 29.8 1.0
CB B:ALA0 4.6 32.6 1.0
O B:HOH463 4.8 34.4 1.0

Calcium binding site 2 out of 2 in 7s14

Go back to Calcium Binding Sites List in 7s14
Calcium binding site 2 out of 2 in the Crystal Structure of Putative Nad(P)H-Flavin Oxidoreductase From Haemophilus Influenzae 86-028NP


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of Putative Nad(P)H-Flavin Oxidoreductase From Haemophilus Influenzae 86-028NP within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Ca303

b:22.3
occ:1.00
OE2 C:GLU7 2.3 33.6 1.0
O D:ALA0 2.3 44.7 1.0
O C:HOH421 2.5 18.2 1.0
OE2 C:GLU11 2.5 26.4 1.0
OE1 C:GLU11 2.6 29.1 1.0
CD C:GLU11 2.9 27.0 1.0
CD C:GLU7 3.4 33.1 1.0
C D:ALA0 3.6 46.7 1.0
CG C:GLU7 4.1 28.4 1.0
O C:HOH406 4.2 24.2 1.0
CG C:GLU11 4.4 25.4 1.0
OE1 C:GLU7 4.4 36.0 1.0
CA D:ALA0 4.4 48.1 1.0
N D:MSE1 4.6 46.1 0.2
N D:MSE1 4.6 45.9 0.8
O D:HOH454 4.7 22.3 1.0
CA D:MSE1 4.7 45.6 0.8
CA D:MSE1 4.7 46.3 0.2
CB D:ALA0 4.8 49.9 1.0

Reference:

Y.Kim, N.Maltseva, M.Endres, T.Crofts, A.Joachimiak. Crystal Structure of Putative Nad(P)H-Flavin Oxidoreductase From Haemophilus Influenzae 86-028NP To Be Published.
Page generated: Fri Nov 5 11:42:38 2021

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