Calcium in PDB 7sc3: Crystal Structure of the N-Domain of Cardiac Muscle Troponin C Tethered to the Switch Region of Cardiac Muscle Troponin I (Orthorhombic Form)

Protein crystallography data

The structure of Crystal Structure of the N-Domain of Cardiac Muscle Troponin C Tethered to the Switch Region of Cardiac Muscle Troponin I (Orthorhombic Form), PDB code: 7sc3 was solved by J.S.Sack, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.95 / 2.23
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 38.849, 40.958, 66.997, 90, 90, 90
R / Rfree (%) 24.3 / 27.8

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the N-Domain of Cardiac Muscle Troponin C Tethered to the Switch Region of Cardiac Muscle Troponin I (Orthorhombic Form) (pdb code 7sc3). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the N-Domain of Cardiac Muscle Troponin C Tethered to the Switch Region of Cardiac Muscle Troponin I (Orthorhombic Form), PDB code: 7sc3:

Calcium binding site 1 out of 1 in 7sc3

Go back to Calcium Binding Sites List in 7sc3
Calcium binding site 1 out of 1 in the Crystal Structure of the N-Domain of Cardiac Muscle Troponin C Tethered to the Switch Region of Cardiac Muscle Troponin I (Orthorhombic Form)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the N-Domain of Cardiac Muscle Troponin C Tethered to the Switch Region of Cardiac Muscle Troponin I (Orthorhombic Form) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca201

b:48.1
occ:1.00
OD1 A:ASP65 2.1 48.4 1.0
OE1 A:GLU76 2.1 37.2 1.0
O A:THR71 2.1 37.3 1.0
OD1 A:ASP67 2.4 51.7 1.0
OG A:SER69 2.8 43.9 1.0
CD A:GLU76 2.9 36.3 1.0
OE2 A:GLU76 2.9 36.9 1.0
CG A:ASP67 3.2 50.5 1.0
CG A:ASP65 3.3 48.4 1.0
C A:THR71 3.3 37.1 1.0
OD2 A:ASP67 3.6 52.2 1.0
CB A:SER69 4.0 42.0 1.0
OD2 A:ASP65 4.1 50.7 1.0
N A:SER69 4.1 41.3 1.0
N A:VAL72 4.2 36.1 1.0
CA A:ASP65 4.2 43.9 1.0
CA A:VAL72 4.2 35.6 1.0
CB A:ASP65 4.2 45.2 1.0
OD2 A:ASP73 4.2 45.8 1.0
OG1 A:THR71 4.2 40.9 1.0
N A:THR71 4.2 38.4 1.0
CG A:GLU76 4.3 34.9 1.0
CA A:THR71 4.3 37.9 1.0
N A:ASP67 4.3 43.9 1.0
CB A:ASP67 4.4 45.8 1.0
N A:ASP73 4.5 35.0 1.0
N A:GLU66 4.5 43.5 1.0
CA A:SER69 4.6 40.9 1.0
C A:ASP65 4.6 44.3 1.0
N A:GLY68 4.6 42.9 1.0
CA A:ASP67 4.8 44.1 1.0
C A:VAL72 4.8 35.4 1.0
CG A:ASP73 4.9 42.6 1.0
N A:GLY70 4.9 39.5 1.0
CB A:THR71 4.9 39.4 1.0
C A:SER69 5.0 40.5 1.0

Reference:

C.Yan, J.S.Sack. X-Ray Structure of A Human Cardiac Muscle Troponin C / Troponin I Chimera in Two Crystal Forms Acta Crystallogr.,Sect.F 2021.
ISSN: ESSN 2053-230X
Page generated: Fri Jul 19 03:59:44 2024

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