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Calcium in PDB 7sie: Structure of Aap A-Domain (Residues 351-605) From Staphylococcus Epidermidis

Protein crystallography data

The structure of Structure of Aap A-Domain (Residues 351-605) From Staphylococcus Epidermidis, PDB code: 7sie was solved by K.E.Atkin, A.S.Brentnall, E.J.Dodson, F.Whelan, L.Clark, J.P.Turkenburg, J.R.Potts, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 16.53 / 1.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 35.853, 68.693, 109.198, 90, 90, 90
R / Rfree (%) 10 / 12.4

Other elements in 7sie:

The structure of Structure of Aap A-Domain (Residues 351-605) From Staphylococcus Epidermidis also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of Aap A-Domain (Residues 351-605) From Staphylococcus Epidermidis (pdb code 7sie). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of Aap A-Domain (Residues 351-605) From Staphylococcus Epidermidis, PDB code: 7sie:

Calcium binding site 1 out of 1 in 7sie

Go back to Calcium Binding Sites List in 7sie
Calcium binding site 1 out of 1 in the Structure of Aap A-Domain (Residues 351-605) From Staphylococcus Epidermidis


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Aap A-Domain (Residues 351-605) From Staphylococcus Epidermidis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca701

b:5.5
occ:1.00
O A:GLY468 2.3 5.9 1.0
O A:HOH857 2.4 6.7 1.0
OD1 A:ASP466 2.4 5.2 1.0
OD2 A:ASP466 2.4 5.7 1.0
OD1 A:ASP476 2.5 6.2 1.0
OD2 A:ASP476 2.5 6.4 1.0
O A:HOH989 2.6 5.4 1.0
OE1 A:GLN481 2.6 6.3 1.0
CG A:ASP466 2.8 4.9 1.0
CG A:ASP476 2.8 6.3 1.0
C A:GLY468 3.5 5.4 1.0
CD A:GLN481 3.6 6.0 1.0
NE2 A:GLN481 3.9 6.1 1.0
O A:HOH954 4.1 9.4 1.0
NH2 A:ARG464 4.1 6.3 1.0
OH A:TYR489 4.2 6.5 1.0
CA A:TYR469 4.3 6.2 1.0
CB A:ASP476 4.3 7.3 1.0
CB A:ASP466 4.3 4.9 1.0
N A:TYR469 4.3 6.0 1.0
O A:LEU452 4.4 5.8 1.0
N A:TYR470 4.4 5.9 1.0
N A:GLY468 4.4 5.0 1.0
CE1 A:TYR489 4.5 5.7 1.0
CA A:GLY468 4.5 5.5 1.0
OD2 A:ASP473 4.6 7.9 1.0
CZ A:TYR489 4.6 5.6 1.0
C A:TYR469 4.6 6.0 1.0
O A:ASP431 4.7 5.1 1.0
CG A:GLN481 5.0 6.5 1.0

Reference:

K.E.Atkin, A.S.Brentnall, L.Clark, F.Whelan, J.P.Turkenburg, J.R.Potts. Structure of Aap A-Domain (Residues 351-605) From Staphylococcus Epidermidis To Be Published.
Page generated: Tue Apr 4 18:40:59 2023

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