Calcium in PDB 7usf: Mouse Mammary Tumor Virus Strand Transfer Complex Intasome

The structure of Mouse Mammary Tumor Virus Strand Transfer Complex Intasome also contains other interesting chemical elements:

Zinc

(Zn)

4 atoms

The binding sites of Calcium atom in the Mouse Mammary Tumor Virus Strand Transfer Complex Intasome (pdb code 7usf). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Mouse Mammary Tumor Virus Strand Transfer Complex Intasome, PDB code: 7usf:

Calcium binding site 1 out of 1 in the Mouse Mammary Tumor Virus Strand Transfer Complex Intasome


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Mouse Mammary Tumor Virus Strand Transfer Complex Intasome within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca501 b:113.4 occ:1.00 OD1 A:ASP65 2.2 95.7 1.0 OD2 A:ASP122 2.5 106.9 1.0 OP2 J:DC21 2.6 117.3 1.0 OD2 A:ASP65 2.7 95.7 1.0 CG A:ASP65 2.7 95.7 1.0 CG A:ASP122 2.9 106.9 1.0 OD1 A:ASP122 3.1 106.9 1.0 CB A:ASP122 3.8 106.9 1.0 P J:DC21 4.0 117.3 1.0 CB A:ASP65 4.2 95.7 1.0 N A:VAL66 4.7 96.9 1.0 OP1 J:DC21 4.7 117.3 1.0 O5' J:DC21 4.8 117.3 1.0 CA A:ASP65 4.8 95.7 1.0 CG2 A:VAL66 4.9 96.9 1.0 C5' J:DC21 4.9 117.3 1.0 O A:VAL66 5.0 96.9 1.0 CB A:ALA124 5.0 107.8 1.0

I.K.Jozwik, W.Li, D.W.Zhang, D.Wong, J.Grawenhoff, A.Ballandras-Colas, S.Aiyer, P.Cherepanov, A.N.Engelman, D.Lyumkis. B-to-A Transition in Target Dna During Retroviral Integration. Nucleic Acids Res. V. 50 8898 2022.
ISSN: ESSN 1362-4962
PubMed: 35947647
DOI: 10.1093/NAR/GKAC644