Calcium in PDB 7ve3: Structure of the Complex of Sheep Lactoperoxidase with Hypoiodite at 2.70 A Resolution

Enzymatic activity of Structure of the Complex of Sheep Lactoperoxidase with Hypoiodite at 2.70 A Resolution

All present enzymatic activity of Structure of the Complex of Sheep Lactoperoxidase with Hypoiodite at 2.70 A Resolution:
1.11.1.7;

Protein crystallography data

The structure of Structure of the Complex of Sheep Lactoperoxidase with Hypoiodite at 2.70 A Resolution, PDB code: 7ve3 was solved by P.K.Singh, S.Yamini, R.P.Singh, A.K.Singh, M.Sinha, P.Kaur, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.97 / 2.70
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 53.942, 80.179, 76.122, 90, 102.86, 90
R / Rfree (%) 19.5 / 27.7

Other elements in 7ve3:

The structure of Structure of the Complex of Sheep Lactoperoxidase with Hypoiodite at 2.70 A Resolution also contains other interesting chemical elements:

Iron (Fe) 1 atom
Iodine (I) 17 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of the Complex of Sheep Lactoperoxidase with Hypoiodite at 2.70 A Resolution (pdb code 7ve3). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of the Complex of Sheep Lactoperoxidase with Hypoiodite at 2.70 A Resolution, PDB code: 7ve3:

Calcium binding site 1 out of 1 in 7ve3

Go back to Calcium Binding Sites List in 7ve3
Calcium binding site 1 out of 1 in the Structure of the Complex of Sheep Lactoperoxidase with Hypoiodite at 2.70 A Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of the Complex of Sheep Lactoperoxidase with Hypoiodite at 2.70 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca602

b:49.4
occ:1.00
 OD1 A:ASP110 2.3 58.0 1.0
O A:ASP110 2.3 40.0 1.0
OG A:SER190 2.4 50.7 1.0
O A:PHE186 2.4 57.0 1.0
O A:THR184 2.4 42.4 1.0
OD1 A:ASP188 2.5 50.9 1.0
OG1 A:THR184 2.6 50.9 1.0
C A:ASP110 3.3 44.4 1.0
CG A:ASP188 3.4 55.1 1.0
C A:THR184 3.5 44.6 1.0
CG A:ASP110 3.5 52.6 1.0
CB A:SER190 3.5 47.9 1.0
C A:PHE186 3.6 54.0 1.0
OD2 A:ASP188 3.8 54.1 1.0
CB A:THR184 3.9 47.8 1.0
CA A:THR184 4.0 47.7 1.0
N A:PHE186 4.0 51.0 1.0
CA A:ASP110 4.1 46.0 1.0
N A:THR184 4.1 45.2 1.0
N A:ASP188 4.2 49.5 1.0
N A:SER190 4.2 40.4 1.0
CB A:ASP110 4.3 52.6 1.0
N A:LEU111 4.3 46.2 1.0
OD2 A:ASP110 4.4 52.2 1.0
CA A:PHE186 4.4 52.0 1.0
CA A:SER190 4.5 48.5 1.0
CA A:LEU111 4.5 50.6 1.0
N A:SER185 4.5 47.3 1.0
CB A:ASP188 4.6 49.0 1.0
N A:LEU187 4.6 52.8 1.0
C A:SER185 4.6 50.6 1.0
O A:HOH749 4.7 56.4 1.0
CA A:LEU187 4.8 47.8 1.0
CA A:ASP188 4.8 47.8 1.0
CG2 A:VAL183 4.9 43.8 1.0
CG2 A:THR184 4.9 45.5 1.0
N A:ALA189 4.9 41.3 1.0
CA A:SER185 5.0 46.7 1.0

Reference:

P.K.Singh, S.Yamini, R.P.Singh, A.K.Singh, M.Sinha, P.Kaur, S.Sharma, T.P.Singh. Structure of the Complex of Sheep Lactoperoxidase with Hypoiodite at 2.70 A Resolution To Be Published.
Page generated: Fri Sep 24 12:19:06 2021

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