Calcium in PDB 7wgr: Cryo-Electron Microscopic Structure of the 2-Oxoglutarate Dehydrogenase (E1) Component of the Human Alpha-Ketoglutarate (2- Oxoglutarate) Dehydrogenase Complex

Enzymatic activity of Cryo-Electron Microscopic Structure of the 2-Oxoglutarate Dehydrogenase (E1) Component of the Human Alpha-Ketoglutarate (2- Oxoglutarate) Dehydrogenase Complex

Other elements in 7wgr:

Calcium Binding Sites:

Calcium binding site 1 out of 2 in 7wgr

Calcium Binding Sites List in 7wgr

Calcium binding site 1 out of 2 in the Cryo-Electron Microscopic Structure of the 2-Oxoglutarate Dehydrogenase (E1) Component of the Human Alpha-Ketoglutarate (2- Oxoglutarate) Dehydrogenase Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryo-Electron Microscopic Structure of the 2-Oxoglutarate Dehydrogenase (E1) Component of the Human Alpha-Ketoglutarate (2- Oxoglutarate) Dehydrogenase Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1101 b:43.2 occ:1.00 O A:HIS143 2.6 42.0 1.0 O A:ASP158 2.9 53.4 1.0 OD1 A:ASP156 3.2 45.5 1.0 O A:SER160 3.4 59.2 1.0 OD2 A:ASP156 3.5 45.5 1.0 C A:HIS143 3.6 42.0 1.0 CG A:ASP156 3.7 45.5 1.0 C A:ASP158 3.9 53.4 1.0 C A:SER159 4.4 55.1 1.0 CA A:HIS143 4.4 42.0 1.0 C A:SER160 4.5 59.2 1.0 CA A:SER159 4.5 55.1 1.0 CB A:HIS143 4.5 42.0 1.0 N A:VAL144 4.5 42.4 1.0 N A:SER160 4.6 59.2 1.0 OD2 A:ASP154 4.6 48.3 1.0 N A:SER159 4.6 55.1 1.0 O A:SER159 4.6 55.1 1.0 CA A:VAL144 4.6 42.4 1.0 OD1 A:ASP154 4.7 48.3 1.0 CA A:ASP158 4.9 53.4 1.0 CB A:ASP158 4.9 53.4 1.0 CG A:ASP154 4.9 48.3 1.0

Calcium binding site 2 out of 2 in 7wgr

Calcium Binding Sites List in 7wgr

Calcium binding site 2 out of 2 in the Cryo-Electron Microscopic Structure of the 2-Oxoglutarate Dehydrogenase (E1) Component of the Human Alpha-Ketoglutarate (2- Oxoglutarate) Dehydrogenase Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Cryo-Electron Microscopic Structure of the 2-Oxoglutarate Dehydrogenase (E1) Component of the Human Alpha-Ketoglutarate (2- Oxoglutarate) Dehydrogenase Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca1101 b:48.3 occ:1.00 OD2 B:ASP156 2.5 46.3 1.0 O B:ASP158 2.5 55.0 1.0 O B:HIS143 2.7 42.0 1.0 CG B:ASP156 3.3 46.3 1.0 OD1 B:ASP156 3.3 46.3 1.0 O B:SER160 3.4 60.9 1.0 C B:HIS143 3.7 42.0 1.0 C B:ASP158 3.7 55.0 1.0 C B:SER159 4.2 56.9 1.0 CA B:SER159 4.2 56.9 1.0 N B:SER159 4.4 56.9 1.0 C B:SER160 4.4 60.9 1.0 CA B:HIS143 4.5 42.0 1.0 N B:SER160 4.5 60.9 1.0 CB B:HIS143 4.5 42.0 1.0 OD1 B:ASP154 4.6 49.2 1.0 N B:VAL144 4.6 43.3 1.0 O B:SER159 4.6 56.9 1.0 CA B:VAL144 4.7 43.3 1.0 CB B:ASP156 4.7 46.3 1.0 OD2 B:ASP154 4.7 49.2 1.0 CA B:ASP158 4.8 55.0 1.0 CB B:ASP158 4.9 55.0 1.0 CG B:ASP154 4.9 49.2 1.0

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