Calcium in PDB 7yo3: Cryo-Em Structure of Human SLO1-LRRC26 Complex with C4 Symmetry

The structure of Cryo-Em Structure of Human SLO1-LRRC26 Complex with C4 Symmetry also contains other interesting chemical elements:

Magnesium

(Mg)

1 atom

The binding sites of Calcium atom in the Cryo-Em Structure of Human SLO1-LRRC26 Complex with C4 Symmetry (pdb code 7yo3). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Cryo-Em Structure of Human SLO1-LRRC26 Complex with C4 Symmetry, PDB code: 7yo3:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Cryo-Em Structure of Human SLO1-LRRC26 Complex with C4 Symmetry


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Cryo-Em Structure of Human SLO1-LRRC26 Complex with C4 Symmetry within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1102 b:20.0 occ:1.00 OD2 A:ASP367 2.4 20.0 1.0 O A:SER533 2.4 20.0 1.0 OE1 A:GLU535 2.4 20.0 1.0 O A:SER600 2.5 20.0 1.0 OE2 A:GLU535 2.5 20.0 1.0 O A:ARG514 2.5 20.0 1.0 CD A:GLU535 2.8 20.0 1.0 C A:SER533 3.5 20.0 1.0 CG A:ASP367 3.6 20.0 1.0 C A:ARG514 3.7 20.0 1.0 C A:SER600 3.7 20.0 1.0 OG A:SER600 3.9 20.0 1.0 CA A:SER533 4.0 20.0 1.0 OD1 A:ASP367 4.2 20.0 1.0 CB A:SER533 4.2 20.0 1.0 CG A:GLU535 4.3 20.0 1.0 CA A:SER600 4.4 20.0 1.0 CA A:SER515 4.4 20.0 1.0 N A:SER515 4.5 20.0 1.0 N A:ARG514 4.5 20.0 1.0 N A:ASN534 4.6 20.0 1.0 CA A:ARG514 4.7 20.0 1.0 CB A:SER600 4.7 20.0 1.0 CB A:ASP367 4.7 20.0 1.0 N A:ASP601 4.7 20.0 1.0 OH A:TYR537 4.9 20.0 1.0 C A:SER515 4.9 20.0 1.0 CA A:ASP601 4.9 20.0 1.0 N A:GLU535 4.9 20.0 1.0 OG A:SER533 5.0 20.0 1.0 CA A:ASN534 5.0 20.0 1.0 N A:PHE516 5.0 20.0 1.0

Calcium binding site 2 out of 2 in the Cryo-Em Structure of Human SLO1-LRRC26 Complex with C4 Symmetry


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Cryo-Em Structure of Human SLO1-LRRC26 Complex with C4 Symmetry within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1103 b:20.0 occ:1.00 O A:ASP892 2.5 20.0 1.0 O A:GLN889 2.5 20.0 1.0 OD1 A:ASP895 2.5 20.0 1.0 CG A:ASP895 3.2 20.0 1.0 OD2 A:ASP895 3.2 20.0 1.0 C A:GLN889 3.6 20.0 1.0 C A:ASP892 3.6 20.0 1.0 CB A:ASP897 3.9 20.0 1.0 OD2 A:ASP897 4.0 20.0 1.0 CA A:GLN889 4.1 20.0 1.0 O A:ASP895 4.1 20.0 1.0 CG A:ASP897 4.3 20.0 1.0 CA A:GLN893 4.3 20.0 1.0 N A:GLN893 4.4 20.0 1.0 CB A:GLN889 4.4 20.0 1.0 CB A:ASP895 4.5 20.0 1.0 C A:ASP895 4.6 20.0 1.0 CA A:ASP892 4.6 20.0 1.0 C A:GLN893 4.7 20.0 1.0 O A:GLN893 4.7 20.0 1.0 N A:ASP892 4.7 20.0 1.0 N A:PHE890 4.7 20.0 1.0 CA A:ASP897 4.8 20.0 1.0 N A:ASP897 4.8 20.0 1.0 N A:ASP895 4.9 20.0 1.0 CA A:ASP895 4.9 20.0 1.0 CB A:ASP892 4.9 20.0 1.0

D.Yamanouchi, D.Yamanouchi, O.Nureki. N/A N/A.