Calcium in PDB 8bbt: Native Tipula Oleracea Nudivirus Polyhedrin - 1960

The structure of Native Tipula Oleracea Nudivirus Polyhedrin - 1960, PDB code: 8bbt was solved by J.R.Keown, J.M.Grimes, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.00 / 1.69
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	53.389, 53.389, 105.578, 90, 90, 120
R / Rfree (%)	18.9 / 21

The binding sites of Calcium atom in the Native Tipula Oleracea Nudivirus Polyhedrin - 1960 (pdb code 8bbt). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Native Tipula Oleracea Nudivirus Polyhedrin - 1960, PDB code: 8bbt:

Calcium binding site 1 out of 1 in the Native Tipula Oleracea Nudivirus Polyhedrin - 1960


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Native Tipula Oleracea Nudivirus Polyhedrin - 1960 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca301 b:14.6 occ:1.00 O A:ASN148 2.3 10.1 1.0 O A:ASP140 2.4 11.5 1.0 OD1 A:ASN143 2.4 14.6 1.0 O A:HOH438 2.4 13.4 1.0 OD1 A:ASP140 2.4 11.5 1.0 O A:HOH469 2.4 10.5 1.0 HD21 A:ASN143 2.7 18.3 1.0 CG A:ASN143 3.1 13.4 1.0 ND2 A:ASN143 3.2 15.2 1.0 C A:ASP140 3.4 12.0 1.0 H A:ASN148 3.5 15.4 1.0 C A:ASN148 3.5 13.2 1.0 CG A:ASP140 3.6 12.2 1.0 HB3 A:ASN148 3.6 14.3 1.0 HA A:ASP140 3.8 14.4 1.0 HA A:LEU149 4.0 16.0 1.0 HD22 A:ASN143 4.0 18.3 1.0 H A:ASN143 4.0 16.8 1.0 HD23 A:LEU149 4.0 14.6 1.0 CA A:ASP140 4.1 12.0 1.0 HA A:PHE141 4.1 13.9 1.0 OG1 A:THR144 4.1 13.4 1.0 HG1 A:THR144 4.2 16.1 1.0 N A:ASN148 4.2 12.8 1.0 CA A:ASN148 4.3 13.0 1.0 H A:THR144 4.3 17.4 1.0 N A:PHE141 4.3 11.5 1.0 CB A:ASN148 4.4 11.9 1.0 CB A:ASP140 4.4 12.4 1.0 HG23 A:THR144 4.5 16.8 1.0 OD2 A:ASP140 4.5 11.5 1.0 CB A:ASN143 4.5 13.7 1.0 O A:PHE141 4.5 14.0 1.0 N A:LEU149 4.5 13.2 1.0 CA A:PHE141 4.6 11.5 1.0 C A:PHE141 4.6 13.2 1.0 N A:ASN143 4.7 14.0 1.0 N A:THR144 4.7 14.5 1.0 CA A:LEU149 4.7 13.3 1.0 HB3 A:ASN143 4.9 16.5 1.0 HB3 A:ASP140 4.9 14.9 1.0 CA A:ASN143 5.0 13.9 1.0 CD2 A:LEU149 5.0 12.1 1.0 HB2 A:ASN148 5.0 14.3 1.0

J.R.Keown, J.M.Grimes. Native Tipula Oleracea Nudivirus Polyhedrin - 1960 To Be Published.