Calcium in PDB 8bck: Recombinant Tipula Oleracea Nudivirus Polyhedrin

The structure of Recombinant Tipula Oleracea Nudivirus Polyhedrin, PDB code: 8bck was solved by J.R.Keown, J.M.Grimes, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.57 / 1.96
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	53.772, 53.772, 105.782, 90, 90, 120
R / Rfree (%)	18.4 / 23

The binding sites of Calcium atom in the Recombinant Tipula Oleracea Nudivirus Polyhedrin (pdb code 8bck). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Recombinant Tipula Oleracea Nudivirus Polyhedrin, PDB code: 8bck:

Calcium binding site 1 out of 1 in the Recombinant Tipula Oleracea Nudivirus Polyhedrin


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Recombinant Tipula Oleracea Nudivirus Polyhedrin within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca301 b:30.3 occ:1.00 O A:ASN148 2.3 25.1 1.0 O A:ASP140 2.4 25.1 1.0 HD22 A:ASN143 2.4 41.4 1.0 O A:HOH409 2.4 23.9 1.0 OD1 A:ASP140 2.5 27.6 1.0 OD1 A:ASN143 2.5 39.6 1.0 O A:HOH440 2.6 23.6 1.0 ND2 A:ASN143 2.9 34.4 1.0 CG A:ASN143 3.0 32.7 1.0 C A:ASP140 3.4 25.2 1.0 H A:ASN148 3.5 33.9 1.0 C A:ASN148 3.5 26.8 1.0 HD21 A:ASN143 3.6 41.4 1.0 HB3 A:ASN148 3.7 32.0 1.0 CG A:ASP140 3.7 28.0 1.0 HD23 A:LEU149 3.8 32.5 1.0 HA A:ASP140 3.9 29.9 1.0 H A:ASN143 4.0 26.8 1.0 HA A:LEU149 4.0 34.1 1.0 OG1 A:THR144 4.0 27.4 1.0 HG1 A:THR144 4.1 32.9 1.0 HA A:PHE141 4.1 29.5 1.0 CA A:ASP140 4.2 24.9 1.0 N A:ASN148 4.2 28.2 1.0 H A:THR144 4.3 30.7 1.0 CA A:ASN148 4.3 25.0 1.0 CB A:ASN143 4.3 24.6 1.0 N A:PHE141 4.4 24.5 1.0 CB A:ASN148 4.4 26.6 1.0 N A:LEU149 4.5 26.0 1.0 CA A:PHE141 4.5 24.6 1.0 OD2 A:ASP140 4.5 25.5 1.0 CB A:ASP140 4.6 25.6 1.0 O A:PHE141 4.6 26.4 1.0 C A:PHE141 4.6 24.5 1.0 HB3 A:ASN143 4.6 29.6 1.0 N A:ASN143 4.6 22.3 1.0 N A:THR144 4.7 25.5 1.0 HG21 A:THR144 4.7 31.2 1.0 CA A:LEU149 4.7 28.4 1.0 CD2 A:LEU149 4.8 27.0 1.0 CA A:ASN143 4.9 27.6 1.0 C A:ASN143 5.0 23.3 1.0 HB2 A:ASN143 5.0 29.6 1.0

J.R.Keown, J.M.Grimes. Recombinant Tipula Oleracea Nudivirus Polyhedrin To Be Published.