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Calcium in PDB 8cr4: Crystal Structure of Recombinant Lasbartif From Pseudomonas Aeruginosa AZPAE14816

Protein crystallography data

The structure of Crystal Structure of Recombinant Lasbartif From Pseudomonas Aeruginosa AZPAE14816, PDB code: 8cr4 was solved by D.Kolling, J.Koehnke, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 21.77 / 0.91
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 40.405, 40.464, 45.376, 100.52, 98.61, 107.45
R / Rfree (%) 19.5 / 20.6

Other elements in 8cr4:

The structure of Crystal Structure of Recombinant Lasbartif From Pseudomonas Aeruginosa AZPAE14816 also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Recombinant Lasbartif From Pseudomonas Aeruginosa AZPAE14816 (pdb code 8cr4). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Recombinant Lasbartif From Pseudomonas Aeruginosa AZPAE14816, PDB code: 8cr4:

Calcium binding site 1 out of 1 in 8cr4

Go back to Calcium Binding Sites List in 8cr4
Calcium binding site 1 out of 1 in the Crystal Structure of Recombinant Lasbartif From Pseudomonas Aeruginosa AZPAE14816


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Recombinant Lasbartif From Pseudomonas Aeruginosa AZPAE14816 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca402

b:12.4
occ:0.00
O A:LEU185 2.3 14.9 1.0
OE2 A:GLU175 2.3 12.0 1.0
OE2 A:GLU172 2.4 11.9 1.0
O A:HOH516 2.4 18.9 1.0
OD1 A:ASP183 2.4 9.3 1.0
OD2 A:ASP136 2.5 10.4 1.0
OE1 A:GLU175 2.6 13.1 1.0
CD A:GLU175 2.8 9.7 1.0
CD A:GLU172 3.4 9.2 1.0
CG A:ASP183 3.4 8.9 1.0
H A:LEU185 3.5 10.2 1.0
C A:LEU185 3.5 9.7 1.0
CG A:ASP136 3.5 8.6 1.0
HB3 A:ASP136 3.5 10.3 1.0
OE1 A:GLU172 3.6 10.2 1.0
OD2 A:ASP183 3.7 11.1 1.0
HA A:ILE186 3.8 10.6 1.0
H A:ASP183 3.8 10.3 1.0
H A:GLY187 3.9 11.2 1.0
CB A:ASP136 4.0 8.6 1.0
HB2 A:LEU185 4.0 11.9 1.0
N A:LEU185 4.1 8.5 1.0
O A:HOH653 4.1 12.4 1.0
HD13 A:ILE186 4.2 27.4 1.0
HB2 A:ASP136 4.2 10.3 1.0
CG A:GLU175 4.3 8.8 1.0
H A:PHE184 4.3 10.0 1.0
CA A:LEU185 4.3 8.4 1.0
OD1 A:ASP136 4.4 9.9 1.0
N A:ILE186 4.4 9.0 1.0
H A:TYR188 4.5 10.8 1.0
CA A:ILE186 4.5 8.8 1.0
HA A:GLU172 4.5 9.1 1.0
HG3 A:GLU175 4.5 10.6 1.0
O A:HOH541 4.5 11.8 1.0
N A:GLY187 4.6 9.3 1.0
O A:HOH648 4.6 21.3 1.0
O A:HOH743 4.6 26.0 1.0
N A:ASP183 4.6 8.6 1.0
N A:PHE184 4.7 8.3 1.0
HB3 A:TYR188 4.7 11.7 1.0
CB A:LEU185 4.7 9.9 1.0
HG2 A:GLU175 4.7 10.6 1.0
HB2 A:ASN182 4.7 10.4 1.0
CB A:ASP183 4.7 9.6 1.0
CG A:GLU172 4.8 8.9 1.0
HG2 A:GLU172 4.9 10.7 1.0
HB2 A:GLU175 5.0 10.3 1.0
C A:ILE186 5.0 8.3 1.0

Reference:

D.Kolling, J.Haupenthal, A.K.H.Hirsch, J.Kohnke. Facile Production of the Pseudomonas Aeruginosa Virulence Factor Lasb in E. Coli For Structure-Based Drug Design. Chembiochem 00185 2023.
ISSN: ESSN 1439-7633
PubMed: 37195753
DOI: 10.1002/CBIC.202300185
Page generated: Fri Jul 19 07:44:55 2024

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