Calcium in PDB 8dos: Crystal Structure of Ferredoxin (Flavodoxin):Nadp(+) Oxidoreductase From Klebsiella Pneumoniae

All present enzymatic activity of Crystal Structure of Ferredoxin (Flavodoxin):Nadp(+) Oxidoreductase From Klebsiella Pneumoniae:
1.18.1.2; 1.19.1.1;

The structure of Crystal Structure of Ferredoxin (Flavodoxin):Nadp(+) Oxidoreductase From Klebsiella Pneumoniae, PDB code: 8dos was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.37 / 1.87
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	47.24, 56.02, 56.11, 106.69, 97.49, 83.4
R / Rfree (%)	17.1 / 20.4

The structure of Crystal Structure of Ferredoxin (Flavodoxin):Nadp(+) Oxidoreductase From Klebsiella Pneumoniae also contains other interesting chemical elements:

Magnesium

(Mg)

1 atom

The binding sites of Calcium atom in the Crystal Structure of Ferredoxin (Flavodoxin):Nadp(+) Oxidoreductase From Klebsiella Pneumoniae (pdb code 8dos). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Crystal Structure of Ferredoxin (Flavodoxin):Nadp(+) Oxidoreductase From Klebsiella Pneumoniae, PDB code: 8dos:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Crystal Structure of Ferredoxin (Flavodoxin):Nadp(+) Oxidoreductase From Klebsiella Pneumoniae


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Ferredoxin (Flavodoxin):Nadp(+) Oxidoreductase From Klebsiella Pneumoniae within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca504 b:25.9 occ:1.00 O B:HOH737 2.4 21.2 1.0 O2B B:FAD501 2.4 21.6 1.0 O A:HOH649 2.4 23.9 1.0 O B:HOH721 2.5 29.0 1.0 O3B B:FAD501 2.6 24.9 1.0 O A:HOH664 2.6 22.1 1.0 O B:HOH754 3.1 21.8 1.0 C3B B:FAD501 3.3 24.1 1.0 C2B B:FAD501 3.4 22.2 1.0 C4B B:FAD501 3.7 27.5 1.0 O A:HOH615 3.8 21.7 1.0 O A:HOH749 4.1 28.5 1.0 O B:HOH750 4.2 17.3 1.0 OE1 A:GLN216 4.3 21.7 1.0 O1A A:NAP502 4.4 19.7 1.0 C1B B:FAD501 4.5 17.8 1.0 NH2 A:ARG144 4.6 22.4 1.0 C5B B:FAD501 4.6 27.3 1.0 NE1 B:TRP248 4.6 17.3 1.0 O4B B:FAD501 4.7 20.4 1.0 CD1 B:TRP248 4.8 16.9 1.0 O B:HOH633 4.8 28.5 1.0 O B:HOH706 4.9 26.4 1.0 ND2 A:ASN214 4.9 14.8 1.0 NE2 A:GLN216 4.9 17.2 1.0

Calcium binding site 2 out of 2 in the Crystal Structure of Ferredoxin (Flavodoxin):Nadp(+) Oxidoreductase From Klebsiella Pneumoniae


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Crystal Structure of Ferredoxin (Flavodoxin):Nadp(+) Oxidoreductase From Klebsiella Pneumoniae within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca504 b:18.9 occ:1.00 OD2 B:ASP62 2.2 17.0 1.0 O B:HOH756 2.3 22.6 1.0 O B:HOH744 2.4 22.6 1.0 O B:HOH618 2.4 14.4 1.0 CG B:ASP62 3.4 12.5 1.0 O B:HOH707 4.3 26.3 1.0 OD1 B:ASP62 4.3 11.8 1.0 CB B:ASP62 4.3 13.2 1.0 O B:HOH710 4.4 14.0 1.0 OD1 B:ASN60 4.6 13.8 1.0 C14 B:1PE503 4.8 26.2 1.0 NH2 B:ARG25 4.9 28.1 1.0

S.Lovell, L.Liu, S.Seibold, K.P.Battaile. Crystal Structure of Ferredoxin (Flavodoxin):Nadp(+) Oxidoreductase From Klebsiella Pneumoniae To Be Published.