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Calcium in PDB 8eg3: Structure of Human Placental Steroid (Estrone/Dhea) Sulfatase at 2.0 Angstrom Resolution

Enzymatic activity of Structure of Human Placental Steroid (Estrone/Dhea) Sulfatase at 2.0 Angstrom Resolution

All present enzymatic activity of Structure of Human Placental Steroid (Estrone/Dhea) Sulfatase at 2.0 Angstrom Resolution:
3.1.6.2;

Protein crystallography data

The structure of Structure of Human Placental Steroid (Estrone/Dhea) Sulfatase at 2.0 Angstrom Resolution, PDB code: 8eg3 was solved by D.Ghosh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.13 / 2.04
Space group P 3 2 1
Cell size a, b, c (Å), α, β, γ (°) 117.19, 117.19, 102.68, 90, 90, 120
R / Rfree (%) 22 / 25.1

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of Human Placental Steroid (Estrone/Dhea) Sulfatase at 2.0 Angstrom Resolution (pdb code 8eg3). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of Human Placental Steroid (Estrone/Dhea) Sulfatase at 2.0 Angstrom Resolution, PDB code: 8eg3:

Calcium binding site 1 out of 1 in 8eg3

Go back to Calcium Binding Sites List in 8eg3
Calcium binding site 1 out of 1 in the Structure of Human Placental Steroid (Estrone/Dhea) Sulfatase at 2.0 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Human Placental Steroid (Estrone/Dhea) Sulfatase at 2.0 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca600

b:46.2
occ:1.00
OD2 A:ASP35 2.2 43.3 1.0
OE1 A:GLN343 2.3 45.9 1.0
OD1 A:ASP36 2.4 46.0 1.0
OD2 A:ASP342 2.5 48.1 1.0
OS3 A:ALS75 2.5 50.1 1.0
OS1 A:ALS75 2.7 37.6 1.0
OD1 A:ASP342 2.8 48.3 1.0
CG A:ASP342 3.0 45.6 1.0
CD A:GLN343 3.1 47.9 1.0
CG A:ASP36 3.2 50.1 1.0
S A:ALS75 3.2 45.0 1.0
CG A:ASP35 3.4 48.0 1.0
NE2 A:GLN343 3.6 53.7 1.0
OD2 A:ASP36 3.6 48.7 1.0
N A:ASP36 3.9 48.5 1.0
CB A:ALS75 3.9 39.8 1.0
OS4 A:ALS75 4.1 47.5 1.0
CA A:ALS75 4.2 39.4 1.0
CG A:GLN343 4.2 51.3 1.0
OD1 A:ASP35 4.2 42.1 1.0
CD2 A:HIS290 4.3 48.6 1.0
N A:ALS75 4.4 43.0 1.0
NZ A:LYS134 4.4 36.8 1.0
OS2 A:ALS75 4.4 46.2 1.0
CA A:ASP35 4.4 47.0 1.0
OG A:ALS75 4.4 38.2 1.0
CB A:ASP36 4.4 49.7 1.0
C A:ASP35 4.4 48.5 1.0
CB A:ASP342 4.5 43.9 1.0
CA A:ASP36 4.5 50.7 1.0
CB A:ASP35 4.5 43.7 1.0
NZ A:LYS368 4.6 53.8 1.0
CE A:LYS368 4.6 55.5 1.0
NH1 A:ARG79 4.6 42.0 1.0
CD A:LYS368 5.0 60.2 1.0

Reference:

D.Ghosh, D.Ghosh. N/A N/A.
ISSN: ISSN 0960-0760
PubMed: 36427797
DOI: 10.1016/J.JSBMB.2022.106228
Page generated: Fri Jul 19 08:10:09 2024

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