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Calcium in PDB 8gpp: Acinetobacter Baumannii Carbonic Anhydrase Paay

Protein crystallography data

The structure of Acinetobacter Baumannii Carbonic Anhydrase Paay, PDB code: 8gpp was solved by Y.Wen, M.Jiao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.17 / 2.09
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 51.073, 93.123, 56.445, 90, 109.41, 90
R / Rfree (%) 19.7 / 25.5

Other elements in 8gpp:

The structure of Acinetobacter Baumannii Carbonic Anhydrase Paay also contains other interesting chemical elements:

Zinc (Zn) 3 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Acinetobacter Baumannii Carbonic Anhydrase Paay (pdb code 8gpp). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Acinetobacter Baumannii Carbonic Anhydrase Paay, PDB code: 8gpp:

Calcium binding site 1 out of 1 in 8gpp

Go back to Calcium Binding Sites List in 8gpp
Calcium binding site 1 out of 1 in the Acinetobacter Baumannii Carbonic Anhydrase Paay


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Acinetobacter Baumannii Carbonic Anhydrase Paay within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca303

b:33.9
occ:1.00
O A:HOH407 2.3 33.0 1.0
OD1 A:ASN100 2.3 35.0 1.0
OD1 C:ASN100 2.4 33.5 1.0
O B:HOH414 2.4 30.3 1.0
OD1 B:ASN100 2.4 36.4 1.0
O C:HOH406 2.5 30.9 1.0
CG A:ASN100 3.5 35.7 1.0
CG B:ASN100 3.5 34.6 1.0
CG C:ASN100 3.5 37.6 1.0
ND2 B:ASN100 4.0 36.3 1.0
ND2 A:ASN100 4.0 34.1 1.0
ND2 C:ASN100 4.0 36.7 1.0
O A:GLY83 4.3 31.9 1.0
O C:HOH417 4.4 38.8 1.0
O C:GLY83 4.4 33.7 1.0
O B:GLY83 4.4 34.9 1.0
O B:HOH421 4.6 35.0 1.0
CB A:ASN100 4.7 32.1 1.0
CB B:ASN100 4.7 33.7 1.0
CB C:ASN100 4.7 33.8 1.0
CA A:ASN100 4.9 34.9 1.0
CA C:ASN100 5.0 35.5 1.0
CA B:ASN100 5.0 33.0 1.0

Reference:

Y.Wen, M.Jiao. Acinetobacter Baumannii Carbonic Anhydrase Structure 2023.
ISSN: ISSN 0969-2126
Page generated: Fri Jul 19 09:14:59 2024

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