Calcium in PDB 8hk7: Structure of PKD2-F604P (Polycystin-2, TRPP2) with Ml-SA1

The binding sites of Calcium atom in the Structure of PKD2-F604P (Polycystin-2, TRPP2) with Ml-SA1 (pdb code 8hk7). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of PKD2-F604P (Polycystin-2, TRPP2) with Ml-SA1, PDB code: 8hk7:

Calcium binding site 1 out of 1 in the Structure of PKD2-F604P (Polycystin-2, TRPP2) with Ml-SA1


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of PKD2-F604P (Polycystin-2, TRPP2) with Ml-SA1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1004 b:79.2 occ:1.00 O B:LEU641 2.5 63.1 1.0 O A:LEU641 2.5 62.9 1.0 O C:LEU641 2.5 63.1 1.0 O D:LEU641 2.5 63.1 1.0 C C:LEU641 3.7 63.1 1.0 C B:LEU641 3.7 63.1 1.0 C A:LEU641 3.7 62.9 1.0 C D:LEU641 3.7 63.1 1.0 CA C:GLY642 4.4 66.9 1.0 CA B:GLY642 4.4 66.3 1.0 CA D:GLY642 4.4 66.5 1.0 CA A:GLY642 4.4 66.0 1.0 N C:GLY642 4.5 66.9 1.0 N B:GLY642 4.5 66.3 1.0 N A:GLY642 4.5 66.0 1.0 N D:GLY642 4.5 66.5 1.0 CA B:LEU641 4.7 63.1 1.0 CA C:LEU641 4.7 63.1 1.0 CA A:LEU641 4.7 62.9 1.0 CA D:LEU641 4.7 63.1 1.0

Z.Wang, M.Chen, Q.Su, T.D.C.Morais, Y.Wang, E.Nazginov, A.R.Pillai, F.Qian, Y.Shi, Y.Yu. Molecular and Structural Basis of the Dual Regulation of the Polycystin-2 Ion Channel By Small-Molecule Ligands. Proc.Natl.Acad.Sci.Usa V. 121 30121 2024.
ISSN: ESSN 1091-6490
PubMed: 38483987
DOI: 10.1073/PNAS.2316230121