Atomistry » Calcium » PDB 8op8-8q50 » 8paq
Atomistry »
  Calcium »
    PDB 8op8-8q50 »
      8paq »

Calcium in PDB 8paq: Structure of the Small Subunit of the Laccase-Like Nlac Protein From Pleurotus Eryngii

Enzymatic activity of Structure of the Small Subunit of the Laccase-Like Nlac Protein From Pleurotus Eryngii

All present enzymatic activity of Structure of the Small Subunit of the Laccase-Like Nlac Protein From Pleurotus Eryngii:
1.10.3.2;

Protein crystallography data

The structure of Structure of the Small Subunit of the Laccase-Like Nlac Protein From Pleurotus Eryngii, PDB code: 8paq was solved by F.J.Medrano, S.Camarero, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.16 / 1.60
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 124.72, 124.72, 55.812, 90, 90, 90
R / Rfree (%) 19.4 / 21.9

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of the Small Subunit of the Laccase-Like Nlac Protein From Pleurotus Eryngii (pdb code 8paq). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of the Small Subunit of the Laccase-Like Nlac Protein From Pleurotus Eryngii, PDB code: 8paq:

Calcium binding site 1 out of 1 in 8paq

Go back to Calcium Binding Sites List in 8paq
Calcium binding site 1 out of 1 in the Structure of the Small Subunit of the Laccase-Like Nlac Protein From Pleurotus Eryngii


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of the Small Subunit of the Laccase-Like Nlac Protein From Pleurotus Eryngii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca201

b:30.5
occ:1.00
OG A:SER112 2.9 23.2 1.0
O A:HOH413 3.0 31.7 1.0
CB A:SER112 3.8 22.9 1.0
CD2 A:TYR111 3.8 22.8 1.0
CE2 A:TYR111 3.8 22.8 1.0
CA A:SER112 4.0 20.8 1.0
CE A:LYS103 4.1 31.4 1.0
O A:HOH415 4.3 37.4 1.0
N A:SER112 4.5 24.5 1.0
O A:ALA154 4.6 22.1 1.0
NZ A:LYS103 4.6 39.6 1.0
O A:HOH301 4.9 14.9 1.0
C A:ALA154 5.0 20.8 1.0

Reference:

P.Aza, D.Linde, G.Molpeceres, J.Vind, F.J.Medrano, S.Camarero. Role and Structure of the Small Subunit Forming Heterodimers with Laccase-Like Enzymes. Protein Sci. V. 32 E4734 2023.
ISSN: ESSN 1469-896X
PubMed: 37483125
DOI: 10.1002/PRO.4734
Page generated: Fri Jul 19 11:10:06 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy