Calcium in PDB 8s03: uc(Nmr) Solution Structure of the CYSD2 Domain of MUC2
Calcium Binding Sites:
The binding sites of Calcium atom in the uc(Nmr) Solution Structure of the CYSD2 Domain of MUC2
(pdb code 8s03). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the
uc(Nmr) Solution Structure of the CYSD2 Domain of MUC2, PDB code: 8s03:
Calcium binding site 1 out
of 1 in 8s03
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Calcium Binding Sites List in 8s03
Calcium binding site 1 out
of 1 in the uc(Nmr) Solution Structure of the CYSD2 Domain of MUC2
Mono view
Stereo pair view
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A full contact list of Calcium with other atoms in the Ca binding
site number 1 of uc(Nmr) Solution Structure of the CYSD2 Domain of MUC2 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca1901
b:25.0
occ:1.00
|
OE1
|
A:GLU1807
|
1.8
|
50.0
|
1.0
|
OD1
|
A:ASP1793
|
1.8
|
50.0
|
1.0
|
OD1
|
A:ASP1805
|
1.8
|
50.0
|
1.0
|
O
|
A:TYR1869
|
2.1
|
25.0
|
1.0
|
O
|
A:GLY1795
|
2.4
|
25.0
|
1.0
|
OD1
|
A:ASN1868
|
2.4
|
25.0
|
1.0
|
H
|
A:TYR1869
|
2.9
|
25.0
|
1.0
|
CG
|
A:ASP1805
|
2.9
|
25.0
|
1.0
|
CD
|
A:GLU1807
|
3.0
|
25.0
|
1.0
|
CG
|
A:ASP1793
|
3.0
|
25.0
|
1.0
|
C
|
A:TYR1869
|
3.3
|
25.0
|
1.0
|
CG
|
A:ASN1868
|
3.5
|
25.0
|
1.0
|
OD2
|
A:ASP1805
|
3.6
|
50.0
|
1.0
|
C
|
A:GLY1795
|
3.6
|
25.0
|
1.0
|
N
|
A:TYR1869
|
3.6
|
25.0
|
1.0
|
OE2
|
A:GLU1807
|
3.6
|
50.0
|
1.0
|
HA
|
A:ASP1793
|
3.6
|
25.0
|
1.0
|
OD2
|
A:ASP1793
|
3.7
|
50.0
|
1.0
|
HA
|
A:LYS1796
|
3.7
|
25.0
|
1.0
|
HA
|
A:ASN1868
|
3.8
|
25.0
|
1.0
|
HD21
|
A:ASN1868
|
3.9
|
25.0
|
1.0
|
HG3
|
A:GLU1870
|
3.9
|
25.0
|
1.0
|
HB3
|
A:ASP1805
|
3.9
|
50.0
|
1.0
|
HA
|
A:GLU1870
|
4.0
|
25.0
|
1.0
|
O
|
A:SER1794
|
4.0
|
25.0
|
1.0
|
CB
|
A:ASP1805
|
4.0
|
25.0
|
1.0
|
HB3
|
A:LYS1796
|
4.1
|
25.0
|
1.0
|
CA
|
A:TYR1869
|
4.1
|
25.0
|
1.0
|
ND2
|
A:ASN1868
|
4.1
|
25.0
|
1.0
|
CB
|
A:ASP1793
|
4.1
|
25.0
|
1.0
|
CG
|
A:GLU1807
|
4.2
|
25.0
|
1.0
|
HG2
|
A:GLU1807
|
4.2
|
25.0
|
1.0
|
CA
|
A:ASP1793
|
4.2
|
25.0
|
1.0
|
N
|
A:GLU1870
|
4.3
|
25.0
|
1.0
|
C
|
A:ASP1793
|
4.4
|
25.0
|
1.0
|
HZ2
|
A:LYS1796
|
4.4
|
25.0
|
1.0
|
C
|
A:SER1794
|
4.4
|
25.0
|
1.0
|
HG3
|
A:GLU1807
|
4.4
|
25.0
|
1.0
|
HB2
|
A:TYR1869
|
4.4
|
50.0
|
1.0
|
N
|
A:LYS1796
|
4.4
|
25.0
|
1.0
|
CA
|
A:LYS1796
|
4.5
|
25.0
|
1.0
|
C
|
A:ASN1868
|
4.5
|
25.0
|
1.0
|
CA
|
A:ASN1868
|
4.5
|
25.0
|
1.0
|
N
|
A:SER1794
|
4.5
|
25.0
|
1.0
|
H
|
A:SER1794
|
4.5
|
25.0
|
1.0
|
HB2
|
A:ASP1793
|
4.5
|
50.0
|
1.0
|
CA
|
A:GLY1795
|
4.5
|
25.0
|
1.0
|
HZ1
|
A:LYS1796
|
4.6
|
25.0
|
1.0
|
CB
|
A:ASN1868
|
4.6
|
25.0
|
1.0
|
CA
|
A:GLU1870
|
4.6
|
25.0
|
1.0
|
HA3
|
A:GLY1795
|
4.6
|
50.0
|
1.0
|
N
|
A:GLY1795
|
4.6
|
25.0
|
1.0
|
HB2
|
A:ASP1805
|
4.8
|
50.0
|
1.0
|
HA
|
A:ASP1805
|
4.8
|
25.0
|
1.0
|
CB
|
A:LYS1796
|
4.8
|
25.0
|
1.0
|
O
|
A:ASP1793
|
4.8
|
25.0
|
1.0
|
CB
|
A:TYR1869
|
4.9
|
25.0
|
1.0
|
NZ
|
A:LYS1796
|
4.9
|
25.0
|
1.0
|
CG
|
A:GLU1870
|
4.9
|
25.0
|
1.0
|
HB3
|
A:ASP1793
|
5.0
|
50.0
|
1.0
|
CA
|
A:ASP1805
|
5.0
|
25.0
|
1.0
|
|
Reference:
C.Recktenwald,
B.G.Karlsson,
M.-J.Garcia-Bonnete,
G.Katona,
M.Jensen,
R.Lymer,
M.Baeckstroem,
M.E.V.Johansson,
G.C.Hansson,
S.Trillo-Muyo.
The Second Cysd Domain of MUC2 and Role in Mucin Organization By Transglutaminase-Based Cross-Linking To Be Published.
Page generated: Fri Jul 19 11:22:18 2024
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