Calcium in PDB 8sx0: Bordetella Filamentous Hemagglutinin (Fhab) C-Terminal Domain

The structure of Bordetella Filamentous Hemagglutinin (Fhab) C-Terminal Domain, PDB code: 8sx0 was solved by B.J.Cuthbert, C.W.Goulding, C.S.Hayes, M.S.Costello, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.71 / 1.65
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	23.06, 46.576, 75.987, 90, 91.69, 90
R / Rfree (%)	17.9 / 20.4

The binding sites of Calcium atom in the Bordetella Filamentous Hemagglutinin (Fhab) C-Terminal Domain (pdb code 8sx0). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Bordetella Filamentous Hemagglutinin (Fhab) C-Terminal Domain, PDB code: 8sx0:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Bordetella Filamentous Hemagglutinin (Fhab) C-Terminal Domain


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Bordetella Filamentous Hemagglutinin (Fhab) C-Terminal Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca203 b:29.3 occ:1.00 HE A:ARG3628 2.3 31.1 1.0 HH21 A:ARG3628 2.6 37.1 1.0 NE A:ARG3628 3.2 25.9 1.0 HG22 A:VAL3625 3.2 28.0 1.0 NH2 A:ARG3628 3.4 30.9 1.0 HA A:VAL3625 3.5 19.7 1.0 CZ A:ARG3628 3.7 26.1 1.0 HB3 A:ARG3628 3.9 23.2 1.0 HG13 A:VAL3625 4.0 27.4 1.0 HB2 A:ARG3628 4.1 23.2 1.0 HH22 A:ARG3628 4.1 37.1 1.0 CG2 A:VAL3625 4.2 23.4 1.0 H2 B:GOL202 4.2 57.6 0.7 CD A:ARG3628 4.2 22.1 1.0 HG3 A:ARG3628 4.3 32.3 1.0 CB A:ARG3628 4.3 19.4 1.0 HD3 A:ARG3628 4.4 26.5 1.0 CA A:VAL3625 4.4 16.4 1.0 O2 B:GOL202 4.5 58.6 0.7 CG A:ARG3628 4.5 26.9 1.0 HG23 A:VAL3625 4.6 28.0 1.0 CB A:VAL3625 4.7 20.8 1.0 H31 B:GOL202 4.7 46.2 0.7 CG1 A:VAL3625 4.7 22.9 1.0 HG21 A:VAL3625 4.7 28.0 1.0 C2 B:GOL202 4.8 48.0 0.7 HG11 A:VAL3625 5.0 27.4 1.0

Calcium binding site 2 out of 2 in the Bordetella Filamentous Hemagglutinin (Fhab) C-Terminal Domain


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Bordetella Filamentous Hemagglutinin (Fhab) C-Terminal Domain within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca203 b:53.4 occ:1.00 HE B:ARG3667 2.1 22.8 1.0 HG B:SER3638 2.2 34.1 1.0 O B:HOH335 2.4 40.5 1.0 NE B:ARG3667 2.9 19.0 1.0 OG B:SER3638 2.9 28.4 1.0 HE3 B:LYS3700 3.1 59.0 1.0 HD2 B:ARG3667 3.2 26.1 1.0 HG2 B:ARG3667 3.3 17.9 1.0 CD B:ARG3667 3.5 21.7 1.0 O B:HOH308 3.5 24.5 1.0 HH21 B:ARG3667 3.6 24.1 1.0 HB2 B:SER3638 3.7 40.0 1.0 CB B:SER3638 3.8 33.3 1.0 HA2 B:GLY3642 3.9 28.6 1.0 CG B:ARG3667 3.9 14.9 1.0 CZ B:ARG3667 4.0 20.3 1.0 CE B:LYS3700 4.0 49.1 1.0 O B:GLY3642 4.0 24.9 1.0 HB3 B:SER3638 4.1 40.0 1.0 NH2 B:ARG3667 4.1 20.1 1.0 HB2 A:HIS3617 4.1 34.7 1.0 HZ1 B:LYS3700 4.2 64.9 1.0 HD2 B:LYS3700 4.2 53.8 1.0 HZ3 B:LYS3700 4.4 64.9 1.0 HD3 B:ARG3667 4.4 26.1 1.0 NZ B:LYS3700 4.4 54.1 1.0 HG3 B:ARG3667 4.4 17.9 1.0 CA B:GLY3642 4.6 23.8 1.0 HA3 B:GLY3642 4.6 28.6 1.0 OE1 B:GLU3668 4.6 24.2 1.0 HE2 B:LYS3700 4.6 59.0 1.0 H B:ARG3667 4.6 21.0 1.0 CD B:LYS3700 4.7 44.8 1.0 C B:GLY3642 4.7 27.5 1.0 HB3 B:ARG3667 4.8 17.9 1.0 O A:HOH343 4.9 23.1 1.0 CB A:HIS3617 5.0 28.9 1.0 HH22 B:ARG3667 5.0 24.1 1.0

B.J.Cuthbert, C.W.Goulding, C.S.Hayes, M.S.Costello. Bordetella Filamentous Hemagglutinin (Fhab) C-Terminal Domain To Be Published.