Calcium in PDB 8wac: Crystal Structure of A Novel Agarose-Binding Carbohydrate Binding Module of An Agarase

The structure of Crystal Structure of A Novel Agarose-Binding Carbohydrate Binding Module of An Agarase, PDB code: 8wac was solved by X.W.Mei, Y.G.Chang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.28 / 1.50
Space group	P 21 2 21
Cell size a, b, c (Å), α, β, γ (°)	36.661, 48.651, 67.314, 90, 90, 90
R / Rfree (%)	16.8 / 20.5

The binding sites of Calcium atom in the Crystal Structure of A Novel Agarose-Binding Carbohydrate Binding Module of An Agarase (pdb code 8wac). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of A Novel Agarose-Binding Carbohydrate Binding Module of An Agarase, PDB code: 8wac:

Calcium binding site 1 out of 1 in the Crystal Structure of A Novel Agarose-Binding Carbohydrate Binding Module of An Agarase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of A Novel Agarose-Binding Carbohydrate Binding Module of An Agarase within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca201 b:9.3 occ:0.50 OD1 A:ASP110 2.3 7.0 1.0 O A:HOH478 2.4 13.1 0.5 O A:HOH405 2.4 9.1 1.0 O A:HOH350 2.5 10.0 1.0 CG A:ASP110 3.5 9.3 1.0 CA A:ASP110 4.0 8.8 1.0 NZ A:LYS10 4.1 12.4 1.0 O A:HOH374 4.2 11.8 1.0 CB A:ASP110 4.3 8.6 1.0 OD2 A:ASP110 4.3 9.0 1.0 C A:ASP110 4.5 8.6 1.0 O A:ASN111 4.5 8.7 1.0 O A:HOH382 4.6 9.8 1.0 O A:ASN109 4.6 10.0 1.0 O A:ASP110 4.9 8.6 1.0 N A:ASN111 4.9 8.5 1.0

X.W.Mei, Y.G.Chang. Crystal Structure of A Novel Agarose-Binding Carbohydrate Binding Module of An Agarase To Be Published.