Calcium in PDB 9bhu: Streptomyces Griseus Family 2B Encapsulin Shell

The binding sites of Calcium atom in the Streptomyces Griseus Family 2B Encapsulin Shell (pdb code 9bhu). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Streptomyces Griseus Family 2B Encapsulin Shell, PDB code: 9bhu:

Calcium binding site 1 out of 1 in the Streptomyces Griseus Family 2B Encapsulin Shell


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Streptomyces Griseus Family 2B Encapsulin Shell within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca501 b:30.0 occ:1.00 O A:THR68 2.2 58.5 1.0 OE2 A:GLU89 2.2 55.1 1.0 OE1 A:GLU89 2.4 55.1 1.0 O A:ARG73 2.5 52.9 1.0 OD1 A:ASP71 2.5 60.8 1.0 OE2 A:GLU92 2.6 61.6 1.0 OE1 A:GLU92 2.6 61.6 1.0 CD A:GLU89 2.6 55.1 1.0 CD A:GLU92 2.9 61.6 1.0 C A:THR68 3.4 58.5 1.0 CG A:ASP71 3.5 60.8 1.0 OE1 A:GLU75 3.5 48.1 1.0 C A:ARG73 3.7 52.9 1.0 OD2 A:ASP71 3.8 60.8 1.0 CA A:VAL69 4.1 59.2 1.0 CG A:GLU89 4.1 55.1 1.0 N A:VAL69 4.2 59.2 1.0 N A:GLY70 4.4 61.3 1.0 N A:THR68 4.4 58.5 1.0 CG A:GLU92 4.4 61.6 1.0 N A:ARG73 4.4 52.9 1.0 OG1 A:THR68 4.5 58.5 1.0 CA A:THR68 4.5 58.5 1.0 N A:ASP71 4.5 60.8 1.0 N A:VAL74 4.6 48.6 1.0 CA A:VAL74 4.6 48.6 1.0 CA A:ARG73 4.6 52.9 1.0 CD A:GLU75 4.6 48.1 1.0 C A:VAL69 4.7 59.2 1.0 CB A:GLU89 4.8 55.1 1.0 N A:GLU75 4.9 48.1 1.0 CB A:ASP71 4.9 60.8 1.0

M.P.Andreas, T.W.Giessen. The Biosynthesis of the Odorant 2-Methylisoborneol Is Compartmentalized Inside A Protein Shell. Nat Commun V. 15 9715 2024.
ISSN: ESSN 2041-1723
PubMed: 39521781
DOI: 10.1038/S41467-024-54175-4