Calcium in PDB 9gvj: MUC5AC Mucin Amino Acids 28 to 1483

The structure of MUC5AC Mucin Amino Acids 28 to 1483 also contains other interesting chemical elements:

Copper

(Cu)

2 atoms

The binding sites of Calcium atom in the MUC5AC Mucin Amino Acids 28 to 1483 (pdb code 9gvj). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 6 binding sites of Calcium where determined in the MUC5AC Mucin Amino Acids 28 to 1483, PDB code: 9gvj:
Jump to Calcium binding site number: 1; 2; 3; 4; 5; 6;

Calcium binding site 1 out of 6 in the MUC5AC Mucin Amino Acids 28 to 1483


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of MUC5AC Mucin Amino Acids 28 to 1483 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1504 b:82.9 occ:1.00 O A:VAL220 2.3 67.2 1.0 OD1 A:ASN215 2.3 63.1 1.0 OE2 A:GLU222 2.3 60.9 1.0 O A:MET217 2.4 68.9 1.0 OD1 A:ASP213 2.7 59.6 1.0 CG A:ASN215 3.0 59.8 1.0 ND2 A:ASN215 3.0 59.7 1.0 OD2 A:ASP93 3.0 58.8 1.0 C A:VAL220 3.4 68.2 1.0 C A:MET217 3.5 66.2 1.0 CD A:GLU222 3.5 63.9 1.0 CG A:ASP213 3.5 59.1 1.0 OD2 A:ASP213 3.6 64.9 1.0 CB A:MET217 4.0 67.1 1.0 CG A:ASP93 4.1 57.2 1.0 CA A:MET217 4.1 66.6 1.0 N A:MET217 4.2 65.7 1.0 N A:VAL220 4.2 68.7 1.0 CG A:GLU222 4.2 64.5 1.0 CB A:SER221 4.2 77.9 1.0 CA A:VAL220 4.2 68.5 1.0 OE1 A:GLU222 4.4 70.1 1.0 N A:SER221 4.4 76.4 1.0 CB A:ASN215 4.5 55.1 1.0 O A:PRO218 4.5 63.4 1.0 CB A:VAL220 4.5 68.7 1.0 C A:PRO218 4.5 61.0 1.0 N A:PRO218 4.5 59.0 1.0 C A:VAL219 4.7 70.4 1.0 CA A:SER221 4.7 75.1 1.0 CE A:MET217 4.8 69.6 1.0 N A:GLU222 4.8 68.7 1.0 N A:ASN215 4.8 55.4 1.0 CA A:PRO218 4.9 61.0 1.0 OD1 A:ASP93 4.9 55.0 1.0 N A:VAL219 4.9 66.7 1.0 CB A:ASP93 4.9 54.7 1.0 OG A:SER221 4.9 80.8 1.0 C A:SER221 4.9 77.7 1.0 CB A:ASP213 4.9 52.7 1.0

Calcium binding site 2 out of 6 in the MUC5AC Mucin Amino Acids 28 to 1483


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of MUC5AC Mucin Amino Acids 28 to 1483 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca1505 b:33.6 occ:1.00 OD1 A:ASN573 2.2 35.4 1.0 O A:ILE577 2.2 35.8 1.0 OD1 A:ASN575 2.3 35.7 1.0 OD1 A:ASP580 2.3 43.2 1.0 OD2 A:ASP446 2.3 33.9 1.0 OD1 A:ASP581 2.3 36.0 1.0 CG A:ASN573 3.2 37.8 1.0 CG A:ASP580 3.3 36.6 1.0 C A:ILE577 3.4 35.1 1.0 CG A:ASP581 3.4 36.1 1.0 CG A:ASN575 3.5 30.8 1.0 CG A:ASP446 3.5 36.5 1.0 ND2 A:ASN573 3.7 40.8 1.0 OD2 A:ASP580 3.7 40.6 1.0 N A:ILE577 3.9 37.0 1.0 N A:ASP581 3.9 34.4 1.0 CA A:ILE577 4.0 30.6 1.0 ND2 A:ASN575 4.1 33.5 1.0 C A:ASP580 4.1 32.8 1.0 CB A:ILE577 4.2 26.8 1.0 CA A:ASP581 4.2 31.5 1.0 OD2 A:ASP581 4.2 35.4 1.0 N A:ASN575 4.2 32.8 1.0 N A:ASN573 4.3 37.0 1.0 CB A:ASP581 4.3 34.6 1.0 CB A:ASP446 4.3 29.2 1.0 N A:GLN578 4.5 31.9 1.0 O A:ASP580 4.5 43.9 1.0 OD1 A:ASP446 4.5 37.9 1.0 N A:PHE574 4.5 34.3 1.0 CB A:ASP580 4.5 28.7 1.0 CB A:ASN573 4.5 22.5 1.0 CB A:ASN575 4.6 24.4 1.0 N A:ASP580 4.6 30.2 1.0 CA A:ASP580 4.7 22.9 1.0 CA A:GLN578 4.7 23.6 1.0 CA A:ASN575 4.7 25.1 1.0 CA A:ASN573 4.8 27.7 1.0 C A:ASN575 4.8 33.8 1.0 CG2 A:ILE577 4.8 32.9 1.0 C A:ASN573 4.8 32.9 1.0 N A:SER576 4.8 38.1 1.0 C A:GLN578 5.0 38.7 1.0

Calcium binding site 3 out of 6 in the MUC5AC Mucin Amino Acids 28 to 1483


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of MUC5AC Mucin Amino Acids 28 to 1483 within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca1504 b:75.9 occ:1.00 O B:VAL220 2.3 68.7 1.0 OE2 B:GLU222 2.3 65.3 1.0 OD1 B:ASN215 2.3 64.5 1.0 O B:MET217 2.4 75.9 1.0 OD1 B:ASP213 2.7 63.7 1.0 ND2 B:ASN215 2.9 63.6 1.0 CG B:ASN215 3.0 63.5 1.0 OD2 B:ASP93 3.1 62.0 1.0 OD2 B:ASP213 3.1 64.9 1.0 CG B:ASP213 3.3 59.9 1.0 C B:VAL220 3.4 71.0 1.0 CD B:GLU222 3.5 66.8 1.0 C B:MET217 3.5 73.9 1.0 CB B:MET217 3.8 77.1 1.0 CA B:MET217 4.0 75.1 1.0 N B:VAL220 4.0 70.6 1.0 CG B:GLU222 4.0 66.6 1.0 N B:MET217 4.1 75.0 1.0 CG B:ASP93 4.1 61.1 1.0 CA B:VAL220 4.1 71.4 1.0 CB B:VAL220 4.4 71.5 1.0 CB B:ASN215 4.4 59.6 1.0 OE1 B:GLU222 4.5 69.7 1.0 N B:SER221 4.5 86.0 1.0 C B:VAL219 4.5 77.8 1.0 CB B:SER221 4.5 87.5 1.0 CE B:MET217 4.6 79.7 1.0 N B:PRO218 4.6 67.0 1.0 C B:PRO218 4.6 71.3 1.0 N B:VAL219 4.7 77.4 1.0 CB B:ASP213 4.8 52.6 1.0 N B:GLU222 4.8 68.8 1.0 O B:PRO218 4.8 72.6 1.0 CA B:SER221 4.9 85.8 1.0 N B:ASN215 4.9 58.9 1.0 OD1 B:ASP93 4.9 60.5 1.0 C B:SER221 4.9 85.4 1.0 O B:VAL219 4.9 79.5 1.0 CB B:ASP93 4.9 58.1 1.0 CA B:PRO218 5.0 70.0 1.0 N B:GLY216 5.0 73.3 1.0 CG1 B:VAL220 5.0 71.3 1.0

Calcium binding site 4 out of 6 in the MUC5AC Mucin Amino Acids 28 to 1483


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of MUC5AC Mucin Amino Acids 28 to 1483 within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca1505 b:29.9 occ:1.00 OD1 B:ASN573 2.3 39.0 1.0 O B:ILE577 2.3 38.4 1.0 OD1 B:ASN575 2.3 34.1 1.0 OD1 B:ASP581 2.3 30.7 1.0 OD1 B:ASP580 2.3 43.3 1.0 OD2 B:ASP446 2.3 35.0 1.0 CG B:ASN573 3.2 40.3 1.0 CG B:ASP580 3.3 41.2 1.0 C B:ILE577 3.4 36.2 1.0 CG B:ASN575 3.4 27.8 1.0 CG B:ASP581 3.5 34.7 1.0 CG B:ASP446 3.5 35.8 1.0 OD2 B:ASP580 3.7 45.3 1.0 ND2 B:ASN573 3.7 42.7 1.0 N B:ILE577 3.9 36.8 1.0 CA B:ILE577 4.0 29.4 1.0 N B:ASP581 4.1 34.3 1.0 CB B:ILE577 4.1 29.0 1.0 ND2 B:ASN575 4.1 26.9 1.0 N B:ASN575 4.1 29.0 1.0 OD2 B:ASP581 4.3 36.8 1.0 C B:ASP580 4.3 37.2 1.0 N B:ASN573 4.3 37.5 1.0 CB B:ASP446 4.3 28.0 1.0 CA B:ASP581 4.4 30.6 1.0 N B:PHE574 4.4 30.4 1.0 OD1 B:ASP446 4.4 39.5 1.0 O B:HOH1620 4.5 23.9 1.0 CB B:ASP581 4.5 32.3 1.0 N B:GLN578 4.5 35.9 1.0 CB B:ASN573 4.5 29.1 1.0 CB B:ASN575 4.6 24.9 1.0 CB B:ASP580 4.6 36.5 1.0 O B:ASP580 4.6 44.3 1.0 CA B:ASN575 4.7 22.0 1.0 C B:ASN573 4.7 33.1 1.0 C B:ASN575 4.7 31.7 1.0 CA B:ASN573 4.7 30.7 1.0 N B:ASP580 4.7 32.8 1.0 N B:SER576 4.7 35.8 1.0 CA B:ASP580 4.7 29.0 1.0 CG2 B:ILE577 4.8 34.9 1.0 CA B:GLN578 4.8 29.3 1.0 C B:SER576 5.0 31.2 1.0

Calcium binding site 5 out of 6 in the MUC5AC Mucin Amino Acids 28 to 1483


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 5 of MUC5AC Mucin Amino Acids 28 to 1483 within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca2000 b:34.5 occ:1.00 OD1 C:ASP1046 2.2 32.9 1.0 OD1 C:ASP1040 2.2 38.4 1.0 O C:ILE1042 2.2 36.8 1.0 OD1 C:ASN1045 2.2 42.9 1.0 OD1 C:ASN1038 2.3 41.7 1.0 OD2 C:ASP915 2.6 38.1 1.0 CG C:ASN1045 3.3 36.1 1.0 CG C:ASP1040 3.3 38.9 1.0 CG C:ASP1046 3.4 33.4 1.0 C C:ILE1042 3.4 34.1 1.0 CG C:ASN1038 3.4 37.5 1.0 OD2 C:ASP1040 3.8 34.7 1.0 CG C:ASP915 3.8 40.9 1.0 ND2 C:ASN1045 3.9 39.4 1.0 N C:ASP1046 3.9 34.7 1.0 ND2 C:ASN1038 4.0 38.2 1.0 N C:ILE1042 4.1 34.4 1.0 CA C:ILE1042 4.1 27.1 1.0 OD2 C:ASP1046 4.1 38.0 1.0 CA C:ASP1046 4.1 29.7 1.0 C C:ASN1045 4.1 34.3 1.0 CB C:ILE1042 4.2 26.6 1.0 CB C:ASP1046 4.3 28.5 1.0 N C:ASP1040 4.3 36.7 1.0 CB C:ASP915 4.4 34.2 1.0 N C:ASN1038 4.4 27.0 1.0 O C:ASN1045 4.5 38.8 1.0 N C:ALA1043 4.5 34.5 1.0 CB C:ASN1045 4.5 32.0 1.0 N C:PHE1039 4.5 35.1 1.0 CB C:ASP1040 4.6 35.0 1.0 CB C:ASN1038 4.6 31.9 1.0 CA C:ASN1045 4.7 30.5 1.0 CA C:ALA1043 4.7 29.0 1.0 OD1 C:ASP915 4.8 42.0 1.0 N C:ASN1045 4.8 33.8 1.0 CA C:ASP1040 4.8 31.0 1.0 CA C:ASN1038 4.9 28.1 1.0 C C:ASN1038 4.9 34.9 1.0 C C:ASP1040 4.9 35.3 1.0 CG2 C:ILE1042 4.9 28.0 1.0

Calcium binding site 6 out of 6 in the MUC5AC Mucin Amino Acids 28 to 1483


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 6 of MUC5AC Mucin Amino Acids 28 to 1483 within 5.0Å range: probe atom residue distance (Å) B Occ D:Ca2000 b:40.4 occ:1.00 OD1 D:ASP1040 2.2 38.9 1.0 OD1 D:ASP1046 2.2 32.4 1.0 O D:ILE1042 2.3 34.4 1.0 OD1 D:ASN1045 2.3 44.0 1.0 ND2 D:ASN1038 2.4 36.9 1.0 OD2 D:ASP915 2.4 41.5 1.0 CG D:ASP1046 3.3 32.3 1.0 CG D:ASP1040 3.4 43.0 1.0 CG D:ASN1045 3.4 40.6 1.0 C D:ILE1042 3.5 35.8 1.0 CG D:ASN1038 3.5 37.2 1.0 CG D:ASP915 3.6 39.9 1.0 N D:ASP1046 3.9 35.2 1.0 OD2 D:ASP1040 4.0 45.6 1.0 OD2 D:ASP1046 4.0 37.1 1.0 OD1 D:ASN1038 4.0 46.0 1.0 ND2 D:ASN1045 4.0 40.9 1.0 N D:ASP1040 4.1 38.4 1.0 CA D:ASP1046 4.1 26.5 1.0 N D:ILE1042 4.1 35.1 1.0 C D:ASN1045 4.2 41.6 1.0 CA D:ILE1042 4.2 32.3 1.0 CB D:ASP1046 4.2 30.8 1.0 CB D:ASP915 4.3 31.6 1.0 N D:PHE1039 4.3 39.3 1.0 N D:ASN1038 4.3 32.9 1.0 CB D:ILE1042 4.4 28.4 1.0 O D:ASN1045 4.5 46.2 1.0 N D:ALA1043 4.5 35.1 1.0 CB D:ASP1040 4.5 37.0 1.0 CB D:ASN1038 4.5 30.0 1.0 OD1 D:ASP915 4.6 40.2 1.0 CB D:ASN1045 4.6 34.5 1.0 CA D:ASP1040 4.7 33.2 1.0 CA D:ALA1043 4.7 29.4 1.0 C D:ASN1038 4.7 32.7 1.0 CA D:ASN1038 4.7 26.4 1.0 CA D:ASN1045 4.7 32.4 1.0 N D:ASN1045 4.8 38.8 1.0 C D:ASP1040 4.8 38.9 1.0 N D:ASP1041 4.9 43.7 1.0

M.Haberman, R.Kamyshinsky, N.Reznik, N.Yeshaya, L.Khmelnitsky, E.G.Plender, E.E.Eichler, D.Fass. MUC5AC Filaments Illuminate the Structural Diversification of Respiratory and Intestinal Mucins To Be Published.