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Calcium in PDB 9jjf: Nematostella Vectensis TRPM2 Protomer in Complex with Adprp/CA2+

Calcium Binding Sites:

The binding sites of Calcium atom in the Nematostella Vectensis TRPM2 Protomer in Complex with Adprp/CA2+ (pdb code 9jjf). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Nematostella Vectensis TRPM2 Protomer in Complex with Adprp/CA2+, PDB code: 9jjf:

Calcium binding site 1 out of 1 in 9jjf

Go back to Calcium Binding Sites List in 9jjf
Calcium binding site 1 out of 1 in the Nematostella Vectensis TRPM2 Protomer in Complex with Adprp/CA2+


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Nematostella Vectensis TRPM2 Protomer in Complex with Adprp/CA2+ within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca4000

b:28.2
occ:1.00
OE1 A:GLN896 2.5 31.2 1.0
OD2 A:ASP921 2.5 26.6 1.0
OD1 A:ASN918 2.6 27.6 1.0
OE2 A:GLU893 2.7 30.6 1.0
OE1 A:GLU893 3.0 30.6 1.0
CD A:GLU893 3.2 30.6 1.0
CD A:GLN896 3.4 31.2 1.0
NE2 A:GLN896 3.5 31.2 1.0
NH2 A:ARG960 3.7 21.7 1.0
CG A:ASP921 3.7 26.6 1.0
CG A:ASN918 3.7 27.6 1.0
OE1 A:GLU1110 3.9 23.0 1.0
CA A:ASN918 4.4 27.6 1.0
NE A:ARG960 4.4 21.7 1.0
CB A:ASP921 4.5 26.6 1.0
N A:ASN918 4.5 27.6 1.0
CZ A:ARG960 4.5 21.7 1.0
ND2 A:ASN918 4.5 27.6 1.0
OD1 A:ASP921 4.5 26.6 1.0
O A:TRP917 4.6 23.8 1.0
CB A:ASN918 4.6 27.6 1.0
C A:TRP917 4.7 23.8 1.0
CG A:GLU893 4.7 30.6 1.0
CD A:GLU1110 4.7 23.0 1.0
CG A:GLN896 4.8 31.2 1.0
OH A:TYR912 4.8 30.8 1.0

Reference:

B.Toth, Y.Jiang, A.Szollosi, Z.Zhang, L.Csanady. A Conserved Mechanism Couples Cytosolic Domain Movements to Pore Gating in the TRPM2 Channel Proc.Natl.Acad.Sci.Usa 2024.
ISSN: ESSN 1091-6490
Page generated: Wed Nov 13 07:24:30 2024

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