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Calcium in PDB 9h7b: Human Transthyretin in Complex with Biphenyl-4-Carboxylic Acid

Protein crystallography data

The structure of Human Transthyretin in Complex with Biphenyl-4-Carboxylic Acid, PDB code: 9h7b was solved by W.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.80 / 1.51
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 83.486, 41.105, 62.775, 90, 90, 90
R / Rfree (%) 16.9 / 22.8

Calcium Binding Sites:

The binding sites of Calcium atom in the Human Transthyretin in Complex with Biphenyl-4-Carboxylic Acid (pdb code 9h7b). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Human Transthyretin in Complex with Biphenyl-4-Carboxylic Acid, PDB code: 9h7b:

Calcium binding site 1 out of 1 in 9h7b

Go back to Calcium Binding Sites List in 9h7b
Calcium binding site 1 out of 1 in the Human Transthyretin in Complex with Biphenyl-4-Carboxylic Acid


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Human Transthyretin in Complex with Biphenyl-4-Carboxylic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca201

b:16.4
occ:1.00
OD1 A:ASP99 2.2 16.4 1.0
OE1 A:GLU66 2.3 18.9 1.0
O A:HOH316 2.3 22.6 1.0
O A:ASP99 2.4 15.9 1.0
CD A:GLU66 3.3 18.3 1.0
C A:ASP99 3.4 15.4 1.0
CG A:ASP99 3.4 15.3 1.0
CA A:ASP99 3.7 14.0 1.0
OE2 A:GLU66 3.7 19.9 1.0
CB A:ASP99 4.1 14.9 1.0
OD2 A:ASP99 4.5 18.2 1.0
CG A:GLU66 4.5 20.8 1.0
N A:SER100 4.6 15.4 1.0
O A:HOH341 4.7 31.9 1.0
O A:ASN98 4.9 13.0 1.0

Reference:

W.Chen, W.Chen. N/A N/A.
ISSN: ISSN 2692-8205
DOI: 10.1101/2025.02.22.639275
Page generated: Thu Jul 10 09:50:49 2025

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