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Calcium in PDB 1aqn: Subtilisin Mutant 8324

Enzymatic activity of Subtilisin Mutant 8324

All present enzymatic activity of Subtilisin Mutant 8324:
3.4.21.62;

Protein crystallography data

The structure of Subtilisin Mutant 8324, PDB code: 1aqn was solved by M.Whitlow, A.J.Howard, J.F.Wood, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 41.640, 79.450, 37.260, 90.00, 114.53, 90.00
R / Rfree (%) 13.9 / n/a

Calcium Binding Sites:

The binding sites of Calcium atom in the Subtilisin Mutant 8324 (pdb code 1aqn). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Subtilisin Mutant 8324, PDB code: 1aqn:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in 1aqn

Go back to Calcium Binding Sites List in 1aqn
Calcium binding site 1 out of 2 in the Subtilisin Mutant 8324


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Subtilisin Mutant 8324 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca295

b:6.4
occ:1.00
O A:VAL81 2.3 5.2 1.0
OD1 A:ASP41 2.3 6.5 1.0
O A:ILE79 2.3 6.4 1.0
OE1 A:GLN2 2.3 7.5 1.0
O A:LEU75 2.4 5.8 1.0
OD1 A:ASN77 2.4 9.6 1.0
OD2 A:ASP41 2.5 4.8 1.0
CG A:ASP41 2.8 5.6 1.0
CD A:GLN2 3.3 8.1 1.0
CG A:ASN77 3.4 9.5 1.0
C A:ILE79 3.5 6.9 1.0
C A:VAL81 3.5 4.7 1.0
C A:LEU75 3.5 5.8 1.0
N A:VAL81 3.7 4.9 1.0
CG A:GLN2 3.8 7.7 1.0
ND2 A:ASN77 3.8 7.2 1.0
N A:ASN77 4.0 9.5 1.0
C A:GLY80 4.1 5.4 1.0
CA A:VAL81 4.2 4.4 1.0
CB A:ASP41 4.3 3.9 1.0
CA A:GLY80 4.3 5.7 1.0
N A:LEU75 4.3 5.0 1.0
N A:ILE79 4.4 7.7 1.0
CA A:LEU75 4.4 5.3 1.0
N A:GLY80 4.4 6.6 1.0
NE2 A:GLN2 4.5 9.9 1.0
CG1 A:ILE79 4.5 6.7 1.0
CA A:ILE79 4.6 7.2 1.0
N A:ASN76 4.6 7.1 1.0
N A:LEU82 4.6 4.7 1.0
CB A:ASN77 4.6 10.1 1.0
CB A:GLN2 4.6 11.0 1.0
CA A:ASN76 4.7 8.7 1.0
CA A:ASN77 4.7 9.1 1.0
O A:ASN77 4.7 7.9 1.0
C A:ASN77 4.7 9.1 1.0
CB A:LEU75 4.8 5.1 1.0
C A:ALA74 4.8 4.7 1.0
CA A:LEU82 4.8 4.3 1.0
C A:ASN76 4.8 9.7 1.0
O A:GLY80 4.9 6.3 1.0
CB A:ALA74 5.0 3.1 1.0

Calcium binding site 2 out of 2 in 1aqn

Go back to Calcium Binding Sites List in 1aqn
Calcium binding site 2 out of 2 in the Subtilisin Mutant 8324


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Subtilisin Mutant 8324 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca297

b:5.6
occ:1.00
O A:HOH483 2.1 11.8 0.6
O A:HOH340 2.3 11.1 0.9
O A:GLU195 2.3 6.3 1.0
OD2 A:ASP197 2.4 4.9 1.0
OD1 A:ASP197 2.5 5.6 1.0
O A:HOH372 2.5 9.3 1.0
O A:HOH296 2.5 14.6 1.0
CG A:ASP197 2.7 5.7 1.0
O A:HOH491 3.3 11.4 0.5
C A:GLU195 3.4 5.3 1.0
O A:HOH353 3.5 8.7 0.4
CA A:GLU195 3.8 5.5 1.0
NH2 A:ARG247 4.0 8.5 1.0
O A:VAL174 4.1 5.6 1.0
CB A:ASP197 4.2 5.1 1.0
CB A:GLU195 4.3 6.5 1.0
O A:HOH303 4.4 7.1 0.7
N A:LEU196 4.5 4.3 1.0
C A:LEU196 4.5 4.1 1.0
N A:ASP197 4.5 4.0 1.0
CB A:ALA176 4.6 2.0 1.0
O A:ALA169 4.7 5.9 1.0
O A:LEU196 4.8 4.6 1.0
CA A:ASP197 4.8 3.4 1.0
O A:PRO172 4.8 7.7 1.0
N A:ALA176 4.8 2.2 1.0
O A:TYR171 4.8 7.6 1.0
CA A:PRO172 4.9 6.8 1.0
CA A:LEU196 4.9 4.6 1.0
O A:PRO194 5.0 6.5 1.0

Reference:

P.Muralikrishna, E.Wickstrom. Large Increases in General Stabilityfor Subtilisin Bpn' Through Incremental Changes in the Free Energy of Unfolding To Be Published.
Page generated: Thu Jul 11 06:01:29 2024

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