Calcium in PDB 1cdl: Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex
Protein crystallography data
The structure of Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex, PDB code: 1cdl
was solved by
W.E.Meador,
F.A.Quiocho,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
10.00 /
2.00
|
|
Space group
|
P 21 21 2
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
166.100,
104.900,
43.320,
90.00,
90.00,
90.00
|
|
R / Rfree (%)
|
20.8 /
n/a
|
Calcium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
16;
Binding sites:
The binding sites of Calcium atom in the Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex
(pdb code 1cdl). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 16 binding sites of Calcium where determined in the
Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex, PDB code: 1cdl:
Jump to Calcium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Calcium binding site 1 out
of 16 in 1cdl
Go back to
Calcium Binding Sites List in 1cdl
Calcium binding site 1 out
of 16 in the Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca148
b:16.6
occ:1.00
|
OD1
|
A:ASP22
|
2.0
|
17.7
|
1.0
|
|
OD1
|
A:ASP20
|
2.0
|
10.2
|
1.0
|
|
OD1
|
A:ASP24
|
2.0
|
41.0
|
1.0
|
|
OE2
|
A:GLU31
|
2.2
|
12.6
|
1.0
|
|
O
|
A:THR26
|
2.2
|
9.2
|
1.0
|
|
OE1
|
A:GLU31
|
2.7
|
20.3
|
1.0
|
|
CD
|
A:GLU31
|
2.8
|
12.1
|
1.0
|
|
CG
|
A:ASP22
|
2.8
|
20.8
|
1.0
|
|
OD2
|
A:ASP22
|
3.0
|
19.8
|
1.0
|
|
CG
|
A:ASP24
|
3.1
|
38.9
|
1.0
|
|
CG
|
A:ASP20
|
3.2
|
12.2
|
1.0
|
|
C
|
A:THR26
|
3.5
|
12.8
|
1.0
|
|
OD2
|
A:ASP24
|
3.8
|
44.7
|
1.0
|
|
OD2
|
A:ASP20
|
4.0
|
21.8
|
1.0
|
|
CB
|
A:ASP24
|
4.1
|
31.5
|
1.0
|
|
CA
|
A:ASP20
|
4.1
|
15.0
|
1.0
|
|
CB
|
A:ASP20
|
4.2
|
16.6
|
1.0
|
|
CG
|
A:GLU31
|
4.2
|
18.2
|
1.0
|
|
N
|
A:THR26
|
4.2
|
15.7
|
1.0
|
|
N
|
A:ASP24
|
4.2
|
30.1
|
1.0
|
|
CB
|
A:ASP22
|
4.2
|
15.4
|
1.0
|
|
OG1
|
A:THR26
|
4.2
|
28.5
|
1.0
|
|
N
|
A:ASP22
|
4.3
|
21.7
|
1.0
|
|
CA
|
A:THR26
|
4.4
|
15.1
|
1.0
|
|
N
|
A:ILE27
|
4.4
|
9.2
|
1.0
|
|
C
|
A:ASP20
|
4.5
|
22.5
|
1.0
|
|
N
|
A:GLY23
|
4.6
|
28.1
|
1.0
|
|
CG2
|
A:THR28
|
4.6
|
12.4
|
1.0
|
|
CA
|
A:ILE27
|
4.6
|
9.1
|
1.0
|
|
CA
|
A:ASP24
|
4.6
|
28.7
|
1.0
|
|
CA
|
A:ASP22
|
4.7
|
21.9
|
1.0
|
|
N
|
A:LYS21
|
4.7
|
24.8
|
1.0
|
|
N
|
A:THR28
|
4.7
|
8.8
|
1.0
|
|
N
|
A:GLY25
|
4.9
|
20.6
|
1.0
|
|
C
|
A:ASP22
|
4.9
|
23.0
|
1.0
|
|
CB
|
A:THR26
|
5.0
|
24.9
|
1.0
|
|
C
|
A:ASP24
|
5.0
|
25.9
|
1.0
|
|
Calcium binding site 2 out
of 16 in 1cdl
Go back to
Calcium Binding Sites List in 1cdl
Calcium binding site 2 out
of 16 in the Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca149
b:23.3
occ:1.00
|
OD1
|
A:ASN60
|
1.8
|
42.0
|
1.0
|
|
OD1
|
A:ASP58
|
1.9
|
42.4
|
1.0
|
|
OD2
|
A:ASP56
|
1.9
|
6.9
|
1.0
|
|
O
|
A:THR62
|
2.4
|
18.4
|
1.0
|
|
OE2
|
A:GLU67
|
2.4
|
26.2
|
1.0
|
|
OE1
|
A:GLU67
|
2.5
|
20.4
|
1.0
|
|
CD
|
A:GLU67
|
2.8
|
22.2
|
1.0
|
|
CG
|
A:ASP58
|
2.9
|
33.3
|
1.0
|
|
CG
|
A:ASN60
|
3.0
|
36.9
|
1.0
|
|
CG
|
A:ASP56
|
3.2
|
12.3
|
1.0
|
|
OD2
|
A:ASP58
|
3.2
|
33.8
|
1.0
|
|
OD2
|
A:ASP64
|
3.5
|
25.7
|
1.0
|
|
C
|
A:THR62
|
3.6
|
20.2
|
1.0
|
|
O
|
A:HOH156
|
3.8
|
16.2
|
1.0
|
|
ND2
|
A:ASN60
|
3.9
|
36.4
|
1.0
|
|
OD1
|
A:ASP56
|
4.0
|
14.1
|
1.0
|
|
CB
|
A:ASN60
|
4.0
|
28.7
|
1.0
|
|
N
|
A:ASN60
|
4.1
|
22.2
|
1.0
|
|
CB
|
A:ASP56
|
4.2
|
19.7
|
1.0
|
|
CA
|
A:ASP56
|
4.2
|
21.0
|
1.0
|
|
CB
|
A:ASP58
|
4.2
|
25.1
|
1.0
|
|
N
|
A:ASP58
|
4.2
|
16.1
|
1.0
|
|
CG
|
A:GLU67
|
4.2
|
17.2
|
1.0
|
|
CA
|
A:ILE63
|
4.3
|
17.6
|
1.0
|
|
CG
|
A:ASP64
|
4.3
|
29.2
|
1.0
|
|
N
|
A:THR62
|
4.4
|
20.2
|
1.0
|
|
N
|
A:ILE63
|
4.4
|
18.1
|
1.0
|
|
OG1
|
A:THR62
|
4.5
|
12.9
|
1.0
|
|
CA
|
A:ASN60
|
4.5
|
23.5
|
1.0
|
|
N
|
A:ASP64
|
4.5
|
18.0
|
1.0
|
|
C
|
A:ASP56
|
4.6
|
26.8
|
1.0
|
|
N
|
A:ALA57
|
4.6
|
27.5
|
1.0
|
|
CA
|
A:ASP58
|
4.6
|
19.5
|
1.0
|
|
CA
|
A:THR62
|
4.6
|
18.2
|
1.0
|
|
OD1
|
A:ASP64
|
4.7
|
29.8
|
1.0
|
|
C
|
A:ASP58
|
4.7
|
20.4
|
1.0
|
|
N
|
A:GLY59
|
4.7
|
20.2
|
1.0
|
|
C
|
A:ASN60
|
4.7
|
26.7
|
1.0
|
|
N
|
A:GLY61
|
4.9
|
22.8
|
1.0
|
|
C
|
A:ILE63
|
4.9
|
16.7
|
1.0
|
|
Calcium binding site 3 out
of 16 in 1cdl
Go back to
Calcium Binding Sites List in 1cdl
Calcium binding site 3 out
of 16 in the Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca150
b:16.2
occ:1.00
|
OD2
|
A:ASP95
|
2.0
|
27.4
|
1.0
|
|
OD2
|
A:ASP93
|
2.1
|
6.3
|
1.0
|
|
OE2
|
A:GLU104
|
2.2
|
4.3
|
1.0
|
|
OE1
|
A:GLU104
|
2.2
|
11.5
|
1.0
|
|
OD1
|
A:ASN97
|
2.3
|
22.1
|
1.0
|
|
O
|
A:TYR99
|
2.4
|
9.7
|
1.0
|
|
CD
|
A:GLU104
|
2.5
|
2.0
|
1.0
|
|
CG
|
A:ASP95
|
2.6
|
15.9
|
1.0
|
|
OD1
|
A:ASP95
|
2.6
|
18.6
|
1.0
|
|
CG
|
A:ASN97
|
3.3
|
24.4
|
1.0
|
|
CG
|
A:ASP93
|
3.4
|
8.8
|
1.0
|
|
C
|
A:TYR99
|
3.7
|
8.3
|
1.0
|
|
CG
|
A:GLU104
|
4.0
|
2.0
|
1.0
|
|
CB
|
A:ASP95
|
4.0
|
18.8
|
1.0
|
|
ND2
|
A:ASN97
|
4.0
|
23.1
|
1.0
|
|
N
|
A:ASP95
|
4.1
|
20.0
|
1.0
|
|
CA
|
A:ASP93
|
4.1
|
3.0
|
1.0
|
|
OD1
|
A:ASP93
|
4.2
|
10.2
|
1.0
|
|
N
|
A:ASN97
|
4.2
|
22.4
|
1.0
|
|
CB
|
A:ASP93
|
4.3
|
4.9
|
1.0
|
|
CB
|
A:ASN97
|
4.4
|
17.8
|
1.0
|
|
C
|
A:ASP93
|
4.4
|
9.3
|
1.0
|
|
N
|
A:GLY96
|
4.4
|
18.2
|
1.0
|
|
CA
|
A:ASP95
|
4.4
|
20.5
|
1.0
|
|
N
|
A:TYR99
|
4.5
|
5.0
|
1.0
|
|
CA
|
A:ILE100
|
4.5
|
8.7
|
1.0
|
|
N
|
A:LYS94
|
4.5
|
10.3
|
1.0
|
|
N
|
A:ILE100
|
4.5
|
8.8
|
1.0
|
|
N
|
A:SER101
|
4.6
|
8.6
|
1.0
|
|
CA
|
A:TYR99
|
4.6
|
5.8
|
1.0
|
|
C
|
A:ASP95
|
4.7
|
20.0
|
1.0
|
|
CA
|
A:ASN97
|
4.7
|
17.1
|
1.0
|
|
OH
|
C:TYR99
|
4.9
|
12.5
|
1.0
|
|
O
|
A:ASP93
|
4.9
|
8.2
|
1.0
|
|
Calcium binding site 4 out
of 16 in 1cdl
Go back to
Calcium Binding Sites List in 1cdl
Calcium binding site 4 out
of 16 in the Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 4 of Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca151
b:18.1
occ:1.00
|
OD2
|
A:ASP131
|
1.7
|
38.8
|
1.0
|
|
OD2
|
A:ASP133
|
1.8
|
36.0
|
1.0
|
|
OE2
|
A:GLU140
|
1.9
|
18.2
|
1.0
|
|
O
|
A:GLN135
|
2.4
|
19.3
|
1.0
|
|
OD1
|
A:ASP129
|
2.6
|
18.4
|
1.0
|
|
CG
|
A:ASP131
|
2.6
|
30.4
|
1.0
|
|
CG
|
A:ASP133
|
2.7
|
33.8
|
1.0
|
|
OD1
|
A:ASP131
|
2.8
|
23.1
|
1.0
|
|
CD
|
A:GLU140
|
2.8
|
15.5
|
1.0
|
|
OD1
|
A:ASP133
|
3.1
|
41.9
|
1.0
|
|
OE1
|
A:GLU140
|
3.1
|
12.8
|
1.0
|
|
C
|
A:GLN135
|
3.6
|
15.2
|
1.0
|
|
CG
|
A:ASP129
|
3.7
|
26.3
|
1.0
|
|
ND2
|
A:ASN137
|
3.8
|
29.5
|
1.0
|
|
CB
|
A:ASP133
|
3.9
|
32.0
|
1.0
|
|
CB
|
A:ASP131
|
4.0
|
26.7
|
1.0
|
|
N
|
A:ASP133
|
4.0
|
28.3
|
1.0
|
|
CG
|
A:GLU140
|
4.2
|
6.9
|
1.0
|
|
N
|
A:ASN137
|
4.3
|
13.4
|
1.0
|
|
N
|
A:ASP131
|
4.3
|
25.6
|
1.0
|
|
CA
|
A:VAL136
|
4.4
|
10.3
|
1.0
|
|
N
|
A:VAL136
|
4.4
|
12.3
|
1.0
|
|
CA
|
A:ASP133
|
4.4
|
26.9
|
1.0
|
|
N
|
A:GLN135
|
4.5
|
24.8
|
1.0
|
|
C
|
A:ASP131
|
4.5
|
25.6
|
1.0
|
|
CA
|
A:ASP131
|
4.5
|
24.9
|
1.0
|
|
CG
|
A:ASN137
|
4.5
|
20.2
|
1.0
|
|
OD2
|
A:ASP129
|
4.6
|
23.9
|
1.0
|
|
CA
|
A:GLN135
|
4.6
|
17.4
|
1.0
|
|
CB
|
A:ASP129
|
4.6
|
24.7
|
1.0
|
|
CA
|
A:ASP129
|
4.7
|
28.2
|
1.0
|
|
O
|
A:ASP131
|
4.7
|
31.6
|
1.0
|
|
N
|
A:GLY132
|
4.7
|
25.7
|
1.0
|
|
C
|
A:VAL136
|
4.8
|
10.9
|
1.0
|
|
CG
|
A:GLN135
|
4.8
|
9.8
|
1.0
|
|
C
|
A:ASP133
|
4.8
|
26.4
|
1.0
|
|
CB
|
A:ASN137
|
4.9
|
19.4
|
1.0
|
|
C
|
A:ASP129
|
5.0
|
29.3
|
1.0
|
|
Calcium binding site 5 out
of 16 in 1cdl
Go back to
Calcium Binding Sites List in 1cdl
Calcium binding site 5 out
of 16 in the Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 5 of Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca148
b:11.6
occ:1.00
|
OD1
|
B:ASP22
|
1.8
|
33.3
|
1.0
|
|
OE2
|
B:GLU31
|
1.8
|
28.7
|
1.0
|
|
OD2
|
B:ASP24
|
1.9
|
28.8
|
1.0
|
|
O
|
B:THR26
|
2.2
|
11.4
|
1.0
|
|
OD1
|
B:ASP20
|
2.2
|
7.2
|
1.0
|
|
OE1
|
B:GLU31
|
2.4
|
20.4
|
1.0
|
|
CD
|
B:GLU31
|
2.4
|
17.8
|
1.0
|
|
CG
|
B:ASP22
|
2.7
|
30.8
|
1.0
|
|
OD2
|
B:ASP22
|
2.8
|
27.8
|
1.0
|
|
CG
|
B:ASP24
|
2.9
|
22.6
|
1.0
|
|
C
|
B:THR26
|
3.4
|
13.9
|
1.0
|
|
OD1
|
B:ASP24
|
3.4
|
24.0
|
1.0
|
|
O
|
B:HOH159
|
3.4
|
19.6
|
1.0
|
|
CG
|
B:ASP20
|
3.4
|
10.5
|
1.0
|
|
CG
|
B:GLU31
|
3.9
|
17.9
|
1.0
|
|
N
|
B:THR26
|
3.9
|
12.8
|
1.0
|
|
N
|
B:ASP24
|
4.0
|
20.2
|
1.0
|
|
CB
|
B:ASP24
|
4.1
|
21.9
|
1.0
|
|
CB
|
B:ASP22
|
4.1
|
27.6
|
1.0
|
|
OG1
|
B:THR26
|
4.1
|
18.4
|
1.0
|
|
CA
|
B:THR26
|
4.2
|
14.0
|
1.0
|
|
CA
|
B:ASP20
|
4.3
|
9.3
|
1.0
|
|
OD2
|
B:ASP20
|
4.3
|
10.6
|
1.0
|
|
N
|
B:ILE27
|
4.4
|
11.6
|
1.0
|
|
CB
|
B:ASP20
|
4.4
|
11.6
|
1.0
|
|
N
|
B:ASP22
|
4.4
|
27.9
|
1.0
|
|
N
|
B:GLY25
|
4.4
|
21.8
|
1.0
|
|
CA
|
B:ASP24
|
4.5
|
23.1
|
1.0
|
|
N
|
B:GLY23
|
4.5
|
20.7
|
1.0
|
|
CA
|
B:ILE27
|
4.6
|
12.1
|
1.0
|
|
CA
|
B:ASP22
|
4.7
|
24.1
|
1.0
|
|
C
|
B:ASP20
|
4.7
|
16.2
|
1.0
|
|
CB
|
B:THR26
|
4.8
|
14.5
|
1.0
|
|
C
|
B:ASP24
|
4.8
|
25.1
|
1.0
|
|
C
|
B:ASP22
|
4.9
|
21.2
|
1.0
|
|
N
|
B:LYS21
|
4.9
|
21.0
|
1.0
|
|
CG2
|
B:THR28
|
4.9
|
6.6
|
1.0
|
|
CB
|
B:GLU31
|
4.9
|
21.2
|
1.0
|
|
Calcium binding site 6 out
of 16 in 1cdl
Go back to
Calcium Binding Sites List in 1cdl
Calcium binding site 6 out
of 16 in the Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 6 of Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca149
b:17.0
occ:1.00
|
OD1
|
B:ASN60
|
1.7
|
10.7
|
1.0
|
|
OD2
|
B:ASP58
|
1.8
|
49.9
|
1.0
|
|
OE1
|
B:GLU67
|
1.8
|
29.6
|
1.0
|
|
OE2
|
B:GLU67
|
2.0
|
38.3
|
1.0
|
|
OD2
|
B:ASP56
|
2.2
|
2.0
|
1.0
|
|
CD
|
B:GLU67
|
2.2
|
27.9
|
1.0
|
|
CG
|
B:ASN60
|
2.6
|
32.4
|
1.0
|
|
CG
|
B:ASP58
|
2.9
|
37.7
|
1.0
|
|
O
|
B:THR62
|
3.0
|
28.6
|
1.0
|
|
ND2
|
B:ASN60
|
3.0
|
35.3
|
1.0
|
|
CG
|
B:ASP56
|
3.3
|
2.0
|
1.0
|
|
OD1
|
B:ASP58
|
3.4
|
34.3
|
1.0
|
|
CG
|
B:GLU67
|
3.7
|
21.3
|
1.0
|
|
N
|
B:ASN60
|
3.8
|
26.5
|
1.0
|
|
CB
|
B:ASN60
|
3.9
|
27.7
|
1.0
|
|
C
|
B:THR62
|
4.1
|
25.5
|
1.0
|
|
CA
|
B:ASP56
|
4.1
|
16.4
|
1.0
|
|
OD1
|
B:ASP56
|
4.1
|
2.0
|
1.0
|
|
N
|
B:ASP58
|
4.1
|
32.8
|
1.0
|
|
CB
|
B:ASP56
|
4.2
|
7.2
|
1.0
|
|
CB
|
B:ASP58
|
4.2
|
36.2
|
1.0
|
|
N
|
B:GLY59
|
4.3
|
26.3
|
1.0
|
|
CA
|
B:ASN60
|
4.3
|
28.3
|
1.0
|
|
C
|
B:ASP56
|
4.4
|
21.8
|
1.0
|
|
N
|
B:ALA57
|
4.4
|
24.3
|
1.0
|
|
CA
|
B:ASP58
|
4.5
|
30.2
|
1.0
|
|
C
|
B:ASP58
|
4.6
|
28.5
|
1.0
|
|
CA
|
B:ILE63
|
4.6
|
15.4
|
1.0
|
|
CB
|
B:GLU67
|
4.7
|
13.0
|
1.0
|
|
OD2
|
B:ASP64
|
4.7
|
22.4
|
1.0
|
|
N
|
B:ASP64
|
4.7
|
13.1
|
1.0
|
|
N
|
B:GLY61
|
4.7
|
24.5
|
1.0
|
|
N
|
B:THR62
|
4.8
|
22.8
|
1.0
|
|
N
|
B:ILE63
|
4.8
|
21.4
|
1.0
|
|
C
|
B:GLY59
|
4.9
|
25.8
|
1.0
|
|
C
|
B:ASN60
|
5.0
|
25.2
|
1.0
|
|
Calcium binding site 7 out
of 16 in 1cdl
Go back to
Calcium Binding Sites List in 1cdl
Calcium binding site 7 out
of 16 in the Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 7 of Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca150
b:15.4
occ:1.00
|
OE2
|
B:GLU104
|
1.9
|
2.3
|
1.0
|
|
O
|
B:TYR99
|
1.9
|
5.3
|
1.0
|
|
OD2
|
B:ASP95
|
2.2
|
21.0
|
1.0
|
|
OD2
|
B:ASP93
|
2.2
|
11.5
|
1.0
|
|
OD1
|
B:ASN97
|
2.4
|
5.9
|
1.0
|
|
CD
|
B:GLU104
|
2.6
|
4.9
|
1.0
|
|
OE1
|
B:GLU104
|
2.7
|
11.7
|
1.0
|
|
C
|
B:TYR99
|
3.1
|
8.3
|
1.0
|
|
CG
|
B:ASP95
|
3.2
|
21.4
|
1.0
|
|
CG
|
B:ASP93
|
3.5
|
11.9
|
1.0
|
|
CG
|
B:ASN97
|
3.5
|
9.8
|
1.0
|
|
OD1
|
B:ASP95
|
3.6
|
23.7
|
1.0
|
|
N
|
B:TYR99
|
4.0
|
2.9
|
1.0
|
|
CG
|
B:GLU104
|
4.0
|
2.0
|
1.0
|
|
N
|
B:ILE100
|
4.0
|
4.4
|
1.0
|
|
CA
|
B:TYR99
|
4.1
|
2.0
|
1.0
|
|
CA
|
B:ASP93
|
4.1
|
7.9
|
1.0
|
|
CA
|
B:ILE100
|
4.2
|
2.0
|
1.0
|
|
ND2
|
B:ASN97
|
4.2
|
13.6
|
1.0
|
|
N
|
B:ASN97
|
4.2
|
10.1
|
1.0
|
|
CB
|
B:ASP93
|
4.3
|
6.9
|
1.0
|
|
OD1
|
B:ASP93
|
4.3
|
7.7
|
1.0
|
|
C
|
B:ASP93
|
4.4
|
8.4
|
1.0
|
|
N
|
B:ASP95
|
4.4
|
24.3
|
1.0
|
|
CB
|
B:ASP95
|
4.5
|
17.5
|
1.0
|
|
O
|
B:HOH190
|
4.5
|
27.9
|
1.0
|
|
CB
|
B:ASN97
|
4.5
|
3.9
|
1.0
|
|
N
|
B:SER101
|
4.5
|
4.8
|
1.0
|
|
N
|
B:GLY96
|
4.6
|
11.7
|
1.0
|
|
CB
|
B:TYR99
|
4.7
|
5.2
|
1.0
|
|
N
|
B:LYS94
|
4.7
|
12.7
|
1.0
|
|
N
|
B:GLY98
|
4.8
|
9.2
|
1.0
|
|
C
|
B:ILE100
|
4.8
|
5.1
|
1.0
|
|
CA
|
B:ASN97
|
4.8
|
9.0
|
1.0
|
|
O
|
B:ASP93
|
4.8
|
11.0
|
1.0
|
|
CA
|
B:ASP95
|
4.8
|
17.3
|
1.0
|
|
CB
|
B:GLU104
|
5.0
|
13.9
|
1.0
|
|
C
|
B:ASP95
|
5.0
|
14.1
|
1.0
|
|
Calcium binding site 8 out
of 16 in 1cdl
Go back to
Calcium Binding Sites List in 1cdl
Calcium binding site 8 out
of 16 in the Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 8 of Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Ca151
b:16.8
occ:1.00
|
OD1
|
B:ASP133
|
1.9
|
30.4
|
1.0
|
|
OD2
|
B:ASP131
|
1.9
|
8.7
|
1.0
|
|
OD1
|
B:ASP129
|
2.4
|
2.0
|
1.0
|
|
O
|
B:GLN135
|
2.5
|
2.0
|
1.0
|
|
OE1
|
B:GLU140
|
2.5
|
20.2
|
1.0
|
|
OE2
|
B:GLU140
|
2.6
|
15.4
|
1.0
|
|
CG
|
B:ASP131
|
2.8
|
5.7
|
1.0
|
|
CD
|
B:GLU140
|
2.9
|
17.2
|
1.0
|
|
CG
|
B:ASP133
|
2.9
|
16.9
|
1.0
|
|
OD1
|
B:ASP131
|
3.0
|
4.7
|
1.0
|
|
OD2
|
B:ASP133
|
3.6
|
22.6
|
1.0
|
|
CG
|
B:ASP129
|
3.7
|
15.3
|
1.0
|
|
C
|
B:GLN135
|
3.7
|
3.5
|
1.0
|
|
CB
|
B:ASP133
|
4.0
|
5.0
|
1.0
|
|
CB
|
B:ASP131
|
4.2
|
2.0
|
1.0
|
|
N
|
B:ASP131
|
4.3
|
8.8
|
1.0
|
|
N
|
B:ASP133
|
4.3
|
3.5
|
1.0
|
|
N
|
B:GLN135
|
4.3
|
3.3
|
1.0
|
|
OD2
|
B:ASP129
|
4.4
|
10.9
|
1.0
|
|
CG
|
B:GLU140
|
4.4
|
16.8
|
1.0
|
|
CA
|
B:ASP131
|
4.5
|
7.0
|
1.0
|
|
CA
|
B:GLN135
|
4.6
|
2.0
|
1.0
|
|
N
|
B:ASN137
|
4.6
|
6.7
|
1.0
|
|
N
|
B:VAL136
|
4.6
|
6.1
|
1.0
|
|
CA
|
B:ASP133
|
4.6
|
2.0
|
1.0
|
|
C
|
B:ASP131
|
4.6
|
12.4
|
1.0
|
|
CA
|
B:VAL136
|
4.7
|
4.6
|
1.0
|
|
CA
|
B:ASP129
|
4.8
|
14.1
|
1.0
|
|
CB
|
B:ASP129
|
4.8
|
15.0
|
1.0
|
|
N
|
B:ILE130
|
4.9
|
15.7
|
1.0
|
|
C
|
B:ASP133
|
4.9
|
5.6
|
1.0
|
|
N
|
B:GLY132
|
4.9
|
14.2
|
1.0
|
|
CG
|
B:ASN137
|
5.0
|
6.3
|
1.0
|
|
O
|
B:ASP131
|
5.0
|
15.7
|
1.0
|
|
OD1
|
B:ASN137
|
5.0
|
11.5
|
1.0
|
|
CB
|
B:GLN135
|
5.0
|
2.4
|
1.0
|
|
Calcium binding site 9 out
of 16 in 1cdl
Go back to
Calcium Binding Sites List in 1cdl
Calcium binding site 9 out
of 16 in the Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 9 of Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca148
b:54.0
occ:1.00
|
OD2
|
C:ASP22
|
1.7
|
50.9
|
1.0
|
|
OD1
|
C:ASP24
|
1.7
|
61.9
|
1.0
|
|
OD2
|
C:ASP20
|
1.8
|
18.0
|
1.0
|
|
OE2
|
C:GLU31
|
1.9
|
47.6
|
1.0
|
|
O
|
C:THR26
|
2.4
|
27.1
|
1.0
|
|
CG
|
C:ASP22
|
2.6
|
48.8
|
1.0
|
|
CD
|
C:GLU31
|
2.8
|
45.7
|
1.0
|
|
OD1
|
C:ASP22
|
2.9
|
50.3
|
1.0
|
|
CG
|
C:ASP24
|
3.0
|
54.0
|
1.0
|
|
CG
|
C:ASP20
|
3.0
|
17.4
|
1.0
|
|
OE1
|
C:GLU31
|
3.1
|
47.1
|
1.0
|
|
C
|
C:THR26
|
3.7
|
30.8
|
1.0
|
|
N
|
C:ASP24
|
3.7
|
36.5
|
1.0
|
|
CB
|
C:ASP24
|
3.7
|
47.4
|
1.0
|
|
CB
|
C:ASP20
|
3.8
|
21.2
|
1.0
|
|
CA
|
C:ASP20
|
3.8
|
24.0
|
1.0
|
|
OD2
|
C:ASP24
|
3.9
|
51.5
|
1.0
|
|
OD1
|
C:ASP20
|
3.9
|
15.3
|
1.0
|
|
CB
|
C:ASP22
|
4.0
|
43.5
|
1.0
|
|
N
|
C:THR26
|
4.0
|
27.1
|
1.0
|
|
C
|
C:ASP20
|
4.1
|
26.6
|
1.0
|
|
N
|
C:ASP22
|
4.2
|
38.2
|
1.0
|
|
CG
|
C:GLU31
|
4.2
|
38.6
|
1.0
|
|
N
|
C:GLY23
|
4.2
|
37.9
|
1.0
|
|
CA
|
C:ASP24
|
4.2
|
40.4
|
1.0
|
|
N
|
C:GLY25
|
4.2
|
41.7
|
1.0
|
|
CA
|
C:ASP22
|
4.5
|
41.5
|
1.0
|
|
CA
|
C:THR26
|
4.5
|
32.8
|
1.0
|
|
O
|
C:ASP20
|
4.5
|
23.9
|
1.0
|
|
C
|
C:ASP22
|
4.5
|
40.0
|
1.0
|
|
N
|
C:LYS21
|
4.6
|
35.1
|
1.0
|
|
C
|
C:ASP24
|
4.6
|
41.9
|
1.0
|
|
N
|
C:ILE27
|
4.6
|
28.5
|
1.0
|
|
C
|
C:GLY23
|
4.7
|
34.3
|
1.0
|
|
OG1
|
C:THR26
|
4.7
|
47.0
|
1.0
|
|
CA
|
C:ILE27
|
4.8
|
29.7
|
1.0
|
|
CA
|
C:GLY23
|
4.9
|
36.6
|
1.0
|
|
Calcium binding site 10 out
of 16 in 1cdl
Go back to
Calcium Binding Sites List in 1cdl
Calcium binding site 10 out
of 16 in the Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Calcium with other atoms in the Ca binding
site number 10 of Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure of A Calmodulin-Peptide Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Ca149
b:42.4
occ:1.00
|
OE1
|
C:GLU67
|
1.7
|
23.4
|
1.0
|
|
OD1
|
C:ASN60
|
1.8
|
54.5
|
1.0
|
|
OD1
|
C:ASP56
|
1.8
|
48.9
|
1.0
|
|
OD1
|
C:ASP58
|
1.9
|
38.7
|
1.0
|
|
O
|
C:THR62
|
2.5
|
34.1
|
1.0
|
|
CD
|
C:GLU67
|
2.5
|
22.2
|
1.0
|
|
OE2
|
C:GLU67
|
2.7
|
20.9
|
1.0
|
|
CG
|
C:ASN60
|
2.9
|
48.3
|
1.0
|
|
OD2
|
C:ASP64
|
2.9
|
39.4
|
1.0
|
|
CG
|
C:ASP58
|
3.0
|
37.6
|
1.0
|
|
CG
|
C:ASP56
|
3.1
|
47.4
|
1.0
|
|
OD2
|
C:ASP58
|
3.4
|
40.0
|
1.0
|
|
ND2
|
C:ASN60
|
3.5
|
43.7
|
1.0
|
|
C
|
C:THR62
|
3.7
|
36.3
|
1.0
|
|
OD2
|
C:ASP56
|
3.8
|
45.9
|
1.0
|
|
CG
|
C:GLU67
|
3.9
|
22.1
|
1.0
|
|
CG
|
C:ASP64
|
3.9
|
41.4
|
1.0
|
|
CB
|
C:ASN60
|
4.1
|
44.1
|
1.0
|
|
N
|
C:ASN60
|
4.1
|
35.9
|
1.0
|
|
CB
|
C:ASP56
|
4.2
|
50.4
|
1.0
|
|
CB
|
C:ASP58
|
4.2
|
39.4
|
1.0
|
|
CA
|
C:ASP56
|
4.3
|
52.7
|
1.0
|
|
OD1
|
C:ASP64
|
4.3
|
44.8
|
1.0
|
|
N
|
C:ASP58
|
4.4
|
44.8
|
1.0
|
|
N
|
C:THR62
|
4.4
|
40.0
|
1.0
|
|
CA
|
C:ASN60
|
4.4
|
40.5
|
1.0
|
|
N
|
C:ASP64
|
4.5
|
27.2
|
1.0
|
|
CA
|
C:ILE63
|
4.5
|
31.0
|
1.0
|
|
N
|
C:ILE63
|
4.6
|
31.3
|
1.0
|
|
CA
|
C:THR62
|
4.7
|
40.3
|
1.0
|
|
CA
|
C:ASP58
|
4.7
|
43.6
|
1.0
|
|
N
|
C:GLY59
|
4.7
|
46.5
|
1.0
|
|
C
|
C:ASN60
|
4.8
|
41.3
|
1.0
|
|
C
|
C:ASP56
|
4.8
|
53.1
|
1.0
|
|
C
|
C:ASP58
|
4.8
|
47.0
|
1.0
|
|
CB
|
C:GLU67
|
4.8
|
21.1
|
1.0
|
|
N
|
C:ALA57
|
4.8
|
50.9
|
1.0
|
|
CG2
|
C:THR62
|
4.9
|
45.1
|
1.0
|
|
C
|
C:ILE63
|
4.9
|
27.9
|
1.0
|
|
N
|
C:GLY61
|
5.0
|
42.8
|
1.0
|
|
Reference:
W.E.Meador,
A.R.Means,
F.A.Quiocho.
Target Enzyme Recognition By Calmodulin: 2.4 A Structure of A Calmodulin-Peptide Complex. Science V. 257 1251 1992.
ISSN: ISSN 0036-8075
PubMed: 1519061
Page generated: Sat Dec 12 02:51:14 2020
|
