Calcium in PDB 1con: The Refined Structure of Cadmium Substituted Concanavalin A at 2.0 Angstroms Resolution

The structure of The Refined Structure of Cadmium Substituted Concanavalin A at 2.0 Angstroms Resolution, PDB code: 1con was solved by J.H.Naismith, J.Habash, S.J.Harrop, J.R.Helliwell, W.N.Hunter, A.J.Kalb(Gilboa), J.Yariv, T.C.M.Wan, S.Weisgerber, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	8.00 / 2.00
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	88.700, 86.500, 62.500, 90.00, 90.00, 90.00
R / Rfree (%)	17.1 / n/a

The structure of The Refined Structure of Cadmium Substituted Concanavalin A at 2.0 Angstroms Resolution also contains other interesting chemical elements:

Cadmium

(Cd)

2 atoms

The binding sites of Calcium atom in the The Refined Structure of Cadmium Substituted Concanavalin A at 2.0 Angstroms Resolution (pdb code 1con). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the The Refined Structure of Cadmium Substituted Concanavalin A at 2.0 Angstroms Resolution, PDB code: 1con:

Calcium binding site 1 out of 1 in the The Refined Structure of Cadmium Substituted Concanavalin A at 2.0 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Refined Structure of Cadmium Substituted Concanavalin A at 2.0 Angstroms Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca239 b:11.2 occ:1.00 OD1 A:ASP10 2.3 13.2 1.0 OD2 A:ASP19 2.3 12.1 1.0 O A:TYR12 2.3 13.1 1.0 O A:HOH287 2.3 13.0 1.0 O A:HOH335 2.5 11.2 1.0 OD2 A:ASP10 2.5 16.0 1.0 OD1 A:ASN14 2.6 17.3 1.0 CG A:ASP10 2.7 11.5 1.0 CG A:ASP19 3.4 8.4 1.0 C A:TYR12 3.5 11.8 1.0 CG A:ASN14 3.7 17.1 1.0 OD1 A:ASP19 3.9 16.5 1.0 N A:ASN14 4.0 11.5 1.0 CB A:ASN14 4.2 10.4 1.0 CD A:CD238 4.2 14.4 1.0 CB A:ASP10 4.2 10.3 1.0 CA A:TYR12 4.3 10.9 1.0 N A:TYR12 4.4 12.3 1.0 N A:PRO13 4.5 22.5 1.0 CB A:TYR12 4.5 12.4 1.0 CA A:PRO13 4.6 17.2 1.0 O A:HOH242 4.6 13.0 1.0 O A:ASP208 4.6 11.3 1.0 C A:PRO13 4.7 17.9 1.0 CB A:ASP19 4.7 4.8 1.0 CE1 A:HIS24 4.7 11.5 1.0 CA A:ASN14 4.7 8.6 1.0 ND2 A:ASN14 4.7 11.1 1.0 OD1 A:ASP208 4.8 12.6 1.0 O A:ARG228 4.9 17.2 1.0 CB A:ARG228 4.9 9.3 1.0 CA A:ARG228 5.0 11.5 1.0

J.H.Naismith, J.Habash, S.Harrop, J.R.Helliwell, W.N.Hunter, T.C.Wan, S.Weisgerber, A.J.Kalb, J.Yariv. Refined Structure of Cadmium-Substituted Concanavalin A at 2.0 A Resolution. Acta Crystallogr.,Sect.D V. 49 561 1993.
ISSN: ISSN 0907-4449
PubMed: 15299493
DOI: 10.1107/S0907444993006390