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Calcium in PDB 1cvl: Crystal Structure of Bacterial Lipase From Chromobacterium Viscosum Atcc 6918

Enzymatic activity of Crystal Structure of Bacterial Lipase From Chromobacterium Viscosum Atcc 6918

All present enzymatic activity of Crystal Structure of Bacterial Lipase From Chromobacterium Viscosum Atcc 6918:
3.1.1.3;

Protein crystallography data

The structure of Crystal Structure of Bacterial Lipase From Chromobacterium Viscosum Atcc 6918, PDB code: 1cvl was solved by D.A.Lang, B.Hofmann, L.Haalck, H.-J.Hecht, F.Spener, R.D.Schmid, D.Schomburg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 1.60
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 41.080, 156.820, 43.610, 90.00, 90.00, 90.00
R / Rfree (%) 17.8 / n/a

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Bacterial Lipase From Chromobacterium Viscosum Atcc 6918 (pdb code 1cvl). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Bacterial Lipase From Chromobacterium Viscosum Atcc 6918, PDB code: 1cvl:

Calcium binding site 1 out of 1 in 1cvl

Go back to Calcium Binding Sites List in 1cvl
Calcium binding site 1 out of 1 in the Crystal Structure of Bacterial Lipase From Chromobacterium Viscosum Atcc 6918


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Bacterial Lipase From Chromobacterium Viscosum Atcc 6918 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca320

b:2.0
occ:1.00
O A:HOH555 2.2 6.9 1.0
OD2 A:ASP241 2.3 11.5 1.0
O A:GLN291 2.3 7.9 1.0
O A:HOH406 2.4 10.1 1.0
OD1 A:ASP287 2.4 7.1 1.0
O A:VAL295 2.4 10.4 1.0
C A:GLN291 3.3 7.9 1.0
CG A:ASP241 3.4 11.5 1.0
CG A:ASP287 3.6 7.1 1.0
C A:VAL295 3.6 10.4 1.0
N A:LEU292 3.6 10.0 1.0
OG A:SER243 4.2 9.9 1.0
CA A:ARG296 4.2 10.4 1.0
OD1 A:ASN284 4.2 7.4 1.0
OD1 A:ASP241 4.2 11.5 1.0
N A:ASP287 4.3 6.5 1.0
CA A:ASP287 4.3 6.5 1.0
OD2 A:ASP287 4.3 7.1 1.0
N A:ARG296 4.4 10.4 1.0
CB A:ASP241 4.4 11.5 1.0
O A:HOH409 4.4 8.4 1.0
ND2 A:ASN284 4.4 7.4 1.0
OG1 A:THR244 4.5 8.1 1.0
CB A:ASP287 4.5 7.1 1.0
CA A:VAL295 4.7 10.4 1.0
CB A:ARG296 4.7 14.9 1.0
C A:LEU286 4.7 6.8 1.0
CA A:GLN291 4.7 7.9 1.0
CG A:ASN284 4.8 7.4 1.0
CB A:VAL295 4.9 10.8 1.0
CB A:LEU286 5.0 10.9 1.0

Reference:

D.Lang, B.Hofmann, L.Haalck, H.J.Hecht, F.Spener, R.D.Schmid, D.Schomburg. Crystal Structure of A Bacterial Lipase From Chromobacterium Viscosum Atcc 6918 Refined at 1.6 Angstroms Resolution. J.Mol.Biol. V. 259 704 1996.
ISSN: ISSN 0022-2836
PubMed: 8683577
DOI: 10.1006/JMBI.1996.0352
Page generated: Sat Dec 12 02:52:05 2020

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