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Calcium in PDB 1deg: The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure

Protein crystallography data

The structure of The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure, PDB code: 1deg was solved by S.Raghunathan, R.Chandross, B.P.Cheng, A.Persechini, S.E.Sobottk, R.H.Kretsinger, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 2.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 45.300, 49.900, 62.400, 90.00, 90.00, 90.00
R / Rfree (%) 23 / n/a

Calcium Binding Sites:

The binding sites of Calcium atom in the The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure (pdb code 1deg). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure, PDB code: 1deg:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in 1deg

Go back to Calcium Binding Sites List in 1deg
Calcium binding site 1 out of 4 in the The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1

b:20.0
occ:1.00
CA A:ILE27 3.5 20.0 1.0
CA A:THR26 4.3 20.0 1.0
CA A:THR28 4.4 20.0 1.0
CA A:ASP24 4.5 20.0 1.0
CA A:ASP20 4.8 20.0 1.0

Calcium binding site 2 out of 4 in 1deg

Go back to Calcium Binding Sites List in 1deg
Calcium binding site 2 out of 4 in the The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca2

b:20.0
occ:1.00
CA A:ASN60 4.1 20.0 1.0
CA A:GLY59 4.3 20.0 1.0
CA A:ILE63 4.3 20.0 1.0
CA A:GLY61 4.3 20.0 1.0
CA A:ASP58 4.5 20.0 1.0
CA A:THR62 4.6 20.0 1.0
CA A:ASP56 4.8 20.0 1.0

Calcium binding site 3 out of 4 in 1deg

Go back to Calcium Binding Sites List in 1deg
Calcium binding site 3 out of 4 in the The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca3

b:20.0
occ:1.00
CA A:ILE100 3.1 20.0 1.0
CA A:ASP93 4.6 20.0 1.0
CA A:ASP95 4.8 20.0 1.0
CA A:TYR99 4.8 20.0 1.0

Calcium binding site 4 out of 4 in 1deg

Go back to Calcium Binding Sites List in 1deg
Calcium binding site 4 out of 4 in the The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca4

b:20.0
occ:1.00
CA A:ASP133 4.2 20.0 1.0
CA A:GLY132 4.2 20.0 1.0
CA A:ASP131 4.7 20.0 1.0
CA A:ASN129 4.8 20.0 1.0

Reference:

S.Raghunathan, R.J.Chandross, B.P.Cheng, A.Persechini, S.E.Sobottka, R.H.Kretsinger. The Linker of Des-GLU84-Calmodulin Is Bent. Proc.Natl.Acad.Sci.Usa V. 90 6869 1993.
ISSN: ISSN 0027-8424
PubMed: 8341712
DOI: 10.1073/PNAS.90.14.6869
Page generated: Sat Dec 12 02:52:47 2020

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