Atomistry » Calcium » PDB 1de4-1dv8 » 1deg
Atomistry »
  Calcium »
    PDB 1de4-1dv8 »
      1deg »

Calcium in PDB 1deg: The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure

Protein crystallography data

The structure of The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure, PDB code: 1deg was solved by S.Raghunathan, R.Chandross, B.P.Cheng, A.Persechini, S.E.Sobottk, R.H.Kretsinger, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 2.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 45.300, 49.900, 62.400, 90.00, 90.00, 90.00
R / Rfree (%) 23 / n/a

Calcium Binding Sites:

The binding sites of Calcium atom in the The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure (pdb code 1deg). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure, PDB code: 1deg:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in 1deg

Go back to Calcium Binding Sites List in 1deg
Calcium binding site 1 out of 4 in the The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca1

b:20.0
occ:1.00
CA A:ILE27 3.5 20.0 1.0
CA A:THR26 4.3 20.0 1.0
CA A:THR28 4.4 20.0 1.0
CA A:ASP24 4.5 20.0 1.0
CA A:ASP20 4.8 20.0 1.0

Calcium binding site 2 out of 4 in 1deg

Go back to Calcium Binding Sites List in 1deg
Calcium binding site 2 out of 4 in the The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca2

b:20.0
occ:1.00
CA A:ASN60 4.1 20.0 1.0
CA A:GLY59 4.3 20.0 1.0
CA A:ILE63 4.3 20.0 1.0
CA A:GLY61 4.3 20.0 1.0
CA A:ASP58 4.5 20.0 1.0
CA A:THR62 4.6 20.0 1.0
CA A:ASP56 4.8 20.0 1.0

Calcium binding site 3 out of 4 in 1deg

Go back to Calcium Binding Sites List in 1deg
Calcium binding site 3 out of 4 in the The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca3

b:20.0
occ:1.00
CA A:ILE100 3.1 20.0 1.0
CA A:ASP93 4.6 20.0 1.0
CA A:ASP95 4.8 20.0 1.0
CA A:TYR99 4.8 20.0 1.0

Calcium binding site 4 out of 4 in 1deg

Go back to Calcium Binding Sites List in 1deg
Calcium binding site 4 out of 4 in the The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of The Linker of Des-GLU84 Calmodulin Is Bent As Seen in the Crystal Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca4

b:20.0
occ:1.00
CA A:ASP133 4.2 20.0 1.0
CA A:GLY132 4.2 20.0 1.0
CA A:ASP131 4.7 20.0 1.0
CA A:ASN129 4.8 20.0 1.0

Reference:

S.Raghunathan, R.J.Chandross, B.P.Cheng, A.Persechini, S.E.Sobottka, R.H.Kretsinger. The Linker of Des-GLU84-Calmodulin Is Bent. Proc.Natl.Acad.Sci.Usa V. 90 6869 1993.
ISSN: ISSN 0027-8424
PubMed: 8341712
DOI: 10.1073/PNAS.90.14.6869
Page generated: Thu Jul 11 07:32:13 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy