Calcium in PDB 1fic: Structure of Human Gamma Fibrinogen 30 Kd Carboxyl Terminal Fragment

The structure of Structure of Human Gamma Fibrinogen 30 Kd Carboxyl Terminal Fragment, PDB code: 1fic was solved by V.C.Yee, D.C.Teller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	10.00 / 2.50
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	164.650, 164.650, 84.930, 90.00, 90.00, 120.00
R / Rfree (%)	17.1 / 24.4

The binding sites of Calcium atom in the Structure of Human Gamma Fibrinogen 30 Kd Carboxyl Terminal Fragment (pdb code 1fic). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Structure of Human Gamma Fibrinogen 30 Kd Carboxyl Terminal Fragment, PDB code: 1fic:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Structure of Human Gamma Fibrinogen 30 Kd Carboxyl Terminal Fragment


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of Human Gamma Fibrinogen 30 Kd Carboxyl Terminal Fragment within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca501 b:32.4 occ:1.00 OD1 A:ASP318 2.3 32.9 1.0 O A:PHE322 2.3 34.6 1.0 OD2 A:ASP318 2.4 44.5 1.0 O A:GLY324 2.4 22.9 1.0 OD1 A:ASP320 2.6 31.8 1.0 CG A:ASP318 2.6 33.1 1.0 C A:PHE322 3.5 35.9 1.0 C A:GLY324 3.6 27.0 1.0 CG A:ASP320 3.6 22.0 1.0 O A:GLU323 3.8 40.0 1.0 O A:ASP320 4.0 32.2 1.0 C A:GLU323 4.0 35.5 1.0 O A:HOH505 4.0 57.3 1.0 O A:HOH504 4.0 52.4 1.0 CB A:ASP318 4.1 28.3 1.0 OD2 A:ASP320 4.1 23.3 1.0 N A:GLY324 4.3 35.2 1.0 N A:PHE322 4.3 27.2 1.0 CA A:PHE322 4.4 29.6 1.0 CA A:GLY324 4.5 30.6 1.0 N A:GLU323 4.5 38.0 1.0 C A:ASP320 4.6 28.8 1.0 N A:ASN325 4.6 24.6 1.0 CA A:GLU323 4.6 37.7 1.0 N A:ASP320 4.6 27.2 1.0 CA A:ASN325 4.7 23.0 1.0 CB A:PHE322 4.7 27.0 1.0 CB A:ASP320 4.8 20.2 1.0 CA A:ASP320 4.9 24.9 1.0 O A:ASP318 4.9 29.7 1.0 O A:HOH691 4.9 49.3 1.0 C A:ASP318 5.0 28.0 1.0

Calcium binding site 2 out of 2 in the Structure of Human Gamma Fibrinogen 30 Kd Carboxyl Terminal Fragment


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Structure of Human Gamma Fibrinogen 30 Kd Carboxyl Terminal Fragment within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca500 b:24.9 occ:1.00 OD2 B:ASP318 1.9 28.9 1.0 O B:HOH503 2.2 17.6 1.0 OD1 B:ASP320 2.2 19.3 1.0 O B:GLY324 2.4 29.9 1.0 O B:PHE322 2.6 39.0 1.0 O B:HOH502 2.6 20.6 1.0 CG B:ASP318 2.7 23.8 1.0 OD1 B:ASP318 2.8 31.2 1.0 CG B:ASP320 3.4 26.7 1.0 C B:PHE322 3.5 39.0 1.0 C B:GLY324 3.6 31.2 1.0 O B:ASP320 4.0 22.5 1.0 C B:GLU323 4.0 41.8 1.0 OD2 B:ASP320 4.0 21.4 1.0 O B:GLU323 4.0 41.5 1.0 CB B:ASP318 4.1 26.0 1.0 CB B:PHE322 4.1 34.5 1.0 N B:GLY324 4.2 38.9 1.0 N B:ASP320 4.2 20.0 1.0 CA B:PHE322 4.2 34.7 1.0 N B:PHE322 4.3 36.2 1.0 N B:GLU323 4.3 44.7 1.0 C B:ASP320 4.4 22.0 1.0 CA B:GLU323 4.5 44.6 1.0 N B:ASN325 4.5 26.1 1.0 CA B:GLY324 4.5 33.5 1.0 CA B:ASN325 4.5 18.1 1.0 CB B:ASP320 4.5 20.4 1.0 CA B:ASP320 4.5 19.4 1.0 CG B:PHE322 4.8 30.6 1.0 C B:ASP318 5.0 23.1 1.0

V.C.Yee, K.P.Pratt, H.C.Cote, I.L.Trong, D.W.Chung, E.W.Davie, R.E.Stenkamp, D.C.Teller. Crystal Structure of A 30 kDa C-Terminal Fragment From the Gamma Chain of Human Fibrinogen. Structure V. 5 125 1997.
ISSN: ISSN 0969-2126
PubMed: 9016719
DOI: 10.1016/S0969-2126(97)00171-8