Calcium in PDB 1fny: Legume Lectin of the Bark of Robinia Pseudoacacia.

The structure of Legume Lectin of the Bark of Robinia Pseudoacacia., PDB code: 1fny was solved by A.Rabijns, C.Verboven, P.Rouge, A.Barre, E.J.Van Damme, W.J.Peumans, C.J.De Ranter, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	15.00 / 1.81
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	64.078, 75.854, 118.084, 90.00, 90.00, 90.00
R / Rfree (%)	18.9 / 21.1

The binding sites of Calcium atom in the Legume Lectin of the Bark of Robinia Pseudoacacia. (pdb code 1fny). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Legume Lectin of the Bark of Robinia Pseudoacacia., PDB code: 1fny:

Calcium binding site 1 out of 1 in the Legume Lectin of the Bark of Robinia Pseudoacacia.


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Legume Lectin of the Bark of Robinia Pseudoacacia. within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca500 b:28.9 occ:1.00 O A:HOH309 2.2 20.2 1.0 OD1 A:ASP127 2.3 16.3 1.0 OD1 A:ASP135 2.3 40.3 1.0 OD1 A:ASN131 2.4 33.5 1.0 O A:PHE129 2.4 22.9 1.0 O A:HOH279 2.5 17.9 1.0 OD2 A:ASP127 2.6 15.6 1.0 CG A:ASP127 2.8 14.1 1.0 CG A:ASN131 3.5 35.6 1.0 CG A:ASP135 3.5 42.5 1.0 C A:PHE129 3.7 24.1 1.0 O A:HOH421 3.9 20.7 1.0 N A:ASN131 4.0 34.6 1.0 OD2 A:ASP135 4.1 42.2 1.0 CB A:ASN131 4.1 35.5 1.0 CB A:ASP127 4.3 10.9 1.0 O A:HOH272 4.5 18.4 1.0 NE1 A:TRP134 4.5 44.5 1.0 CA A:PHE129 4.5 21.1 1.0 OD1 A:ASP87 4.5 13.8 1.0 O A:ASP87 4.6 10.6 1.0 ND2 A:ASN131 4.6 35.3 1.0 N A:SER130 4.6 27.1 1.0 N A:PHE129 4.6 16.8 1.0 CA A:SER130 4.7 30.2 1.0 CD1 A:PHE129 4.7 24.2 1.0 C A:SER130 4.7 32.6 1.0 CB A:ASP135 4.7 42.1 1.0 CA A:ASN131 4.7 36.0 1.0 O A:GLY105 4.7 14.1 1.0 CB A:PHE129 4.7 21.2 1.0 CA A:GLY105 4.9 13.1 1.0

A.Rabijns, C.Verboven, P.Rouge, A.Barre, E.J.Van Damme, W.J.Peumans, C.J.De Ranter. Structure of A Legume Lectin From the Bark of Robinia Pseudoacacia and Its Complex with N-Acetylgalactosamine. Proteins V. 44 470 2001.
ISSN: ISSN 0887-3585
PubMed: 11484224
DOI: 10.1002/PROT.1112