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Calcium in PDB 1ga6: Crystal Structure Analysis of Pscp (Pseudomonas Serine-Carboxyl Proteinase) Complexed with A Fragment of Tyrostatin (This Enzyme Renamed "Sedolisin" in 2003)

Enzymatic activity of Crystal Structure Analysis of Pscp (Pseudomonas Serine-Carboxyl Proteinase) Complexed with A Fragment of Tyrostatin (This Enzyme Renamed "Sedolisin" in 2003)

All present enzymatic activity of Crystal Structure Analysis of Pscp (Pseudomonas Serine-Carboxyl Proteinase) Complexed with A Fragment of Tyrostatin (This Enzyme Renamed "Sedolisin" in 2003):
3.4.23.37;

Protein crystallography data

The structure of Crystal Structure Analysis of Pscp (Pseudomonas Serine-Carboxyl Proteinase) Complexed with A Fragment of Tyrostatin (This Enzyme Renamed "Sedolisin" in 2003), PDB code: 1ga6 was solved by A.Wlodawer, M.Li, Z.Dauter, A.Gustchina, K.Uchida, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.00
Space group P 62
Cell size a, b, c (Å), α, β, γ (°) 97.400, 97.400, 83.350, 90.00, 90.00, 120.00
R / Rfree (%) 9.9 / 13.1

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure Analysis of Pscp (Pseudomonas Serine-Carboxyl Proteinase) Complexed with A Fragment of Tyrostatin (This Enzyme Renamed "Sedolisin" in 2003) (pdb code 1ga6). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure Analysis of Pscp (Pseudomonas Serine-Carboxyl Proteinase) Complexed with A Fragment of Tyrostatin (This Enzyme Renamed "Sedolisin" in 2003), PDB code: 1ga6:

Calcium binding site 1 out of 1 in 1ga6

Go back to Calcium Binding Sites List in 1ga6
Calcium binding site 1 out of 1 in the Crystal Structure Analysis of Pscp (Pseudomonas Serine-Carboxyl Proteinase) Complexed with A Fragment of Tyrostatin (This Enzyme Renamed "Sedolisin" in 2003)


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure Analysis of Pscp (Pseudomonas Serine-Carboxyl Proteinase) Complexed with A Fragment of Tyrostatin (This Enzyme Renamed "Sedolisin" in 2003) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca374

b:7.1
occ:1.00
 O A:VAL329 2.3 8.0 1.0
O A:GLY346 2.3 7.4 1.0
OD2 A:ASP348 2.3 7.3 1.0
OD1 A:ASP328 2.3 8.2 1.0
O A:GLY344 2.3 8.5 1.0
O A:HOH401 2.4 7.3 1.0
CG A:ASP348 3.4 6.5 1.0
CG A:ASP328 3.5 8.8 1.0
C A:GLY346 3.5 7.3 1.0
C A:VAL329 3.5 7.7 1.0
C A:GLY344 3.6 8.9 1.0
N A:GLY346 3.8 8.6 1.0
N A:VAL329 3.8 7.4 1.0
N A:GLY344 4.0 8.3 1.0
OD2 A:ASP328 4.0 10.5 1.0
C A:THR345 4.1 8.5 1.0
CA A:GLY346 4.1 8.1 1.0
CA A:VAL329 4.2 7.2 1.0
OD1 A:ASP348 4.2 6.4 1.0
CB A:ASP348 4.2 6.7 1.0
O A:HOH423 4.3 8.5 1.0
O A:GLY352 4.3 6.2 1.0
C A:ASP328 4.3 8.6 1.0
OG1 A:THR351 4.3 6.7 1.0
CA A:GLY344 4.4 10.6 1.0
N A:ASP348 4.4 6.2 1.0
N A:THR345 4.5 10.1 1.0
N A:LYS330 4.5 8.0 1.0
CA A:THR345 4.5 10.3 1.0
N A:TRP347 4.5 6.8 1.0
C A:TRP347 4.6 6.5 1.0
CB A:ASP328 4.6 8.4 1.0
CA A:ASP328 4.6 7.9 1.0
CB A:VAL329 4.7 7.4 1.0
O A:THR345 4.7 9.6 1.0
CA A:LYS330 4.7 9.2 1.0
CA A:TRP347 4.8 6.3 1.0
O A:HOH525 4.8 17.5 1.0
CG A:LYS330 4.9 13.0 1.0
O A:ASP328 4.9 12.3 1.0

Reference:

A.Wlodawer, M.Li, Z.Dauter, A.Gustchina, K.Uchida, H.Oyama, B.M.Dunn, K.Oda. Carboxyl Proteinase From Pseudomonas Defines A Novel Family of Subtilisin-Like Enzymes. Nat.Struct.Biol. V. 8 442 2001.
ISSN: ISSN 1072-8368
PubMed: 11323721
DOI: 10.1038/87610
Page generated: Sat Dec 12 02:57:37 2020

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