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Calcium in PDB 1hu0: Crystal Structure of An HOGG1-Dna Borohydride Trapped Intermediate Complex

Protein crystallography data

The structure of Crystal Structure of An HOGG1-Dna Borohydride Trapped Intermediate Complex, PDB code: 1hu0 was solved by J.C.Fromme, S.D.Bruner, W.Yang, M.Karplus, G.L.Verdine, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.14 / 2.35
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 91.988, 91.988, 211.615, 90.00, 90.00, 120.00
R / Rfree (%) 21 / 24.5

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of An HOGG1-Dna Borohydride Trapped Intermediate Complex (pdb code 1hu0). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of An HOGG1-Dna Borohydride Trapped Intermediate Complex, PDB code: 1hu0:

Calcium binding site 1 out of 1 in 1hu0

Go back to Calcium Binding Sites List in 1hu0
Calcium binding site 1 out of 1 in the Crystal Structure of An HOGG1-Dna Borohydride Trapped Intermediate Complex


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of An HOGG1-Dna Borohydride Trapped Intermediate Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Ca100

b:63.2
occ:1.00
O E:HOH6 2.8 39.0 1.0
OP2 E:DA22 3.8 57.5 1.0
N7 E:DA22 4.3 41.3 1.0
N7 E:DG24 4.3 39.6 1.0
C8 E:DA22 4.3 41.5 1.0
OP2 E:DG24 4.4 47.8 1.0
OD1 A:ASN149 4.4 43.5 1.0
O A:HOH399 4.7 41.5 1.0
OP1 E:DG24 4.7 47.4 1.0
C8 E:DG24 4.8 38.7 1.0
C2' E:DC21 4.9 61.3 1.0

Reference:

J.C.Fromme, S.D.Bruner, W.Yang, M.Karplus, G.L.Verdine. Product-Assisted Catalysis in Base-Excision Dna Repair Nat.Struct.Biol. V. 10 204 2003.
ISSN: ISSN 1072-8368
PubMed: 12592398
DOI: 10.1038/NSB902
Page generated: Sat Dec 12 02:59:55 2020

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