Calcium in PDB 1hz8: Solution Structure and Backbone Dynamics of A Concatemer of Egf-Homology Modules of the Human Low Density Lipoprotein Receptor

The binding sites of Calcium atom in the Solution Structure and Backbone Dynamics of A Concatemer of Egf-Homology Modules of the Human Low Density Lipoprotein Receptor (pdb code 1hz8). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Solution Structure and Backbone Dynamics of A Concatemer of Egf-Homology Modules of the Human Low Density Lipoprotein Receptor, PDB code: 1hz8:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Solution Structure and Backbone Dynamics of A Concatemer of Egf-Homology Modules of the Human Low Density Lipoprotein Receptor


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Solution Structure and Backbone Dynamics of A Concatemer of Egf-Homology Modules of the Human Low Density Lipoprotein Receptor within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca83 b:0.0 occ:1.00 HA A:ASN3 2.5 0.0 1.0 OE2 A:GLU4 2.7 0.0 1.0 OD1 A:ASP18 2.7 0.0 1.0 HB2 A:ASP18 2.7 0.0 1.0 OE1 A:GLU4 2.7 0.0 1.0 H A:GLU4 2.8 0.0 1.0 O A:THR2 2.8 0.0 1.0 CD A:GLU4 2.9 0.0 1.0 CG A:ASP18 3.2 0.0 1.0 SG A:CYS5 3.4 0.0 1.0 CB A:ASP18 3.4 0.0 1.0 CA A:ASN3 3.5 0.0 1.0 N A:GLU4 3.5 0.0 1.0 H A:CYS5 3.5 0.0 1.0 C A:THR2 3.7 0.0 1.0 C A:ASN3 3.9 0.0 1.0 N A:ASN3 4.0 0.0 1.0 O A:GLY1 4.1 0.0 1.0 OD2 A:ASP18 4.1 0.0 1.0 HB3 A:ASP18 4.2 0.0 1.0 HA A:ASP18 4.2 0.0 1.0 CG A:GLU4 4.2 0.0 1.0 N A:CYS5 4.2 0.0 1.0 HB2 A:CYS16 4.3 0.0 1.0 OD1 A:ASN3 4.3 0.0 1.0 HG2 A:GLU4 4.4 0.0 1.0 CA A:ASP18 4.5 0.0 1.0 HG23 A:THR2 4.6 0.0 1.0 CA A:GLU4 4.6 0.0 1.0 CB A:CYS5 4.6 0.0 1.0 CB A:ASN3 4.6 0.0 1.0 HB2 A:CYS5 4.7 0.0 1.0 CG A:ASN3 4.8 0.0 1.0 CB A:GLU4 4.8 0.0 1.0 C A:GLU4 4.9 0.0 1.0 HB2 A:ASN3 4.9 0.0 1.0 SG A:CYS16 4.9 0.0 1.0 HB3 A:GLU4 5.0 0.0 1.0 C A:GLY1 5.0 0.0 1.0 H A:ASN3 5.0 0.0 1.0

Calcium binding site 2 out of 2 in the Solution Structure and Backbone Dynamics of A Concatemer of Egf-Homology Modules of the Human Low Density Lipoprotein Receptor


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Solution Structure and Backbone Dynamics of A Concatemer of Egf-Homology Modules of the Human Low Density Lipoprotein Receptor within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca84 b:0.0 occ:1.00 HB3 A:ASP41 2.5 0.0 1.0 OD1 A:ASN57 2.6 0.0 1.0 O A:ILE42 2.7 0.0 1.0 OE1 A:GLU44 2.7 0.0 1.0 O A:LEU58 2.7 0.0 1.0 OD2 A:ASP41 2.7 0.0 1.0 OE2 A:GLU44 2.8 0.0 1.0 CD A:GLU44 3.1 0.0 1.0 H A:GLY60 3.2 0.0 1.0 CB A:ASP41 3.4 0.0 1.0 HA A:ASP43 3.5 0.0 1.0 CG A:ASP41 3.5 0.0 1.0 H A:LEU58 3.6 0.0 1.0 H A:GLU44 3.6 0.0 1.0 HB3 A:TYR62 3.7 0.0 1.0 O A:ASP41 3.7 0.0 1.0 C A:ILE42 3.7 0.0 1.0 HD1 A:TYR62 3.7 0.0 1.0 C A:ASP41 3.8 0.0 1.0 CG A:ASN57 3.8 0.0 1.0 C A:LEU58 3.9 0.0 1.0 HD22 A:ASN57 4.0 0.0 1.0 HA2 A:GLY60 4.0 0.0 1.0 N A:GLY60 4.1 0.0 1.0 CA A:ASP41 4.1 0.0 1.0 HB2 A:ASP41 4.2 0.0 1.0 N A:ILE42 4.2 0.0 1.0 HG2 A:GLU40 4.2 0.0 1.0 HA A:GLU59 4.2 0.0 1.0 H A:ASP41 4.3 0.0 1.0 ND2 A:ASN57 4.3 0.0 1.0 CA A:ASP43 4.4 0.0 1.0 CD1 A:TYR62 4.4 0.0 1.0 N A:LEU58 4.4 0.0 1.0 N A:ASP43 4.5 0.0 1.0 N A:GLU44 4.5 0.0 1.0 CA A:GLY60 4.6 0.0 1.0 CG A:GLU44 4.6 0.0 1.0 N A:ASP41 4.6 0.0 1.0 H A:TYR62 4.6 0.0 1.0 CB A:TYR62 4.6 0.0 1.0 H A:ILE42 4.6 0.0 1.0 OD1 A:ASP41 4.7 0.0 1.0 CA A:ILE42 4.7 0.0 1.0 HE1 A:PHE31 4.7 0.0 1.0 HA A:ASN57 4.8 0.0 1.0 CG A:TYR62 4.8 0.0 1.0 CA A:LEU58 4.9 0.0 1.0 N A:GLU59 4.9 0.0 1.0 HG22 A:ILE42 4.9 0.0 1.0 CA A:GLU59 4.9 0.0 1.0

N.D.Kurniawan, K.Aliabadizadeh, I.M.Brereton, P.A.Kroon, R.Smith. uc(Nmr) Structure and Backbone Dynamics of A Concatemer of Epidermal Growth Factor Homology Modules of the Human Low-Density Lipoprotein Receptor. J.Mol.Biol. V. 311 341 2001.
ISSN: ISSN 0022-2836
PubMed: 11478865
DOI: 10.1006/JMBI.2001.4867