Calcium in PDB 1i0u: Solution Structure and Backbone Dynamics of A Concatemer of Egf-Homology Modules of the Human Low Density Lipoprotein Receptor

The binding sites of Calcium atom in the Solution Structure and Backbone Dynamics of A Concatemer of Egf-Homology Modules of the Human Low Density Lipoprotein Receptor (pdb code 1i0u). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Solution Structure and Backbone Dynamics of A Concatemer of Egf-Homology Modules of the Human Low Density Lipoprotein Receptor, PDB code: 1i0u:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Solution Structure and Backbone Dynamics of A Concatemer of Egf-Homology Modules of the Human Low Density Lipoprotein Receptor


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Solution Structure and Backbone Dynamics of A Concatemer of Egf-Homology Modules of the Human Low Density Lipoprotein Receptor within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca83 b:30.0 occ:1.00 H A:GLU4 2.4 30.0 1.0 HA A:ASN3 2.4 30.0 1.0 HB2 A:ASP18 2.4 30.0 1.0 OE1 A:GLU4 2.7 30.0 1.0 OD1 A:ASP18 2.7 30.0 1.0 OE2 A:GLU4 2.7 30.0 1.0 O A:THR2 2.8 30.0 1.0 CD A:GLU4 2.9 30.0 1.0 N A:GLU4 3.2 30.0 1.0 CB A:ASP18 3.3 30.0 1.0 CG A:ASP18 3.3 30.0 1.0 CA A:ASN3 3.4 30.0 1.0 H A:CYS5 3.6 30.0 1.0 HA A:ASP18 3.7 30.0 1.0 C A:ASN3 3.7 30.0 1.0 C A:THR2 3.7 30.0 1.0 N A:ASN3 4.0 30.0 1.0 HB2 A:CYS16 4.0 30.0 1.0 HB2 A:GLU4 4.0 30.0 1.0 OD1 A:ASN3 4.0 30.0 1.0 CA A:ASP18 4.1 30.0 1.0 HB3 A:ASP18 4.1 30.0 1.0 SG A:CYS5 4.2 30.0 1.0 CG A:GLU4 4.2 30.0 1.0 CA A:GLU4 4.3 30.0 1.0 CB A:GLU4 4.3 30.0 1.0 H A:ASP18 4.4 30.0 1.0 N A:CYS5 4.4 30.0 1.0 OD2 A:ASP18 4.5 30.0 1.0 HG23 A:THR2 4.5 30.0 1.0 CB A:ASN3 4.5 30.0 1.0 N A:ASP18 4.5 30.0 1.0 O A:CYS16 4.7 30.0 1.0 HG3 A:GLU4 4.7 30.0 1.0 H A:GLY1 4.7 30.0 1.0 CG A:ASN3 4.7 30.0 1.0 HB2 A:ASN3 4.8 30.0 1.0 C A:GLU4 4.8 30.0 1.0 O A:ASN3 4.9 30.0 1.0 HD1 A:TYR23 4.9 30.0 1.0 H A:ASN3 4.9 30.0 1.0 CD1 A:TYR23 4.9 30.0 1.0 HG2 A:GLU4 4.9 30.0 1.0

Calcium binding site 2 out of 2 in the Solution Structure and Backbone Dynamics of A Concatemer of Egf-Homology Modules of the Human Low Density Lipoprotein Receptor


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Solution Structure and Backbone Dynamics of A Concatemer of Egf-Homology Modules of the Human Low Density Lipoprotein Receptor within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca84 b:30.0 occ:1.00 OD1 A:ASN57 2.7 30.0 1.0 O A:ILE42 2.7 30.0 1.0 OE1 A:GLU44 2.7 30.0 1.0 OD2 A:ASP41 2.7 30.0 1.0 OE2 A:GLU44 2.8 30.0 1.0 H A:GLY60 2.8 30.0 1.0 O A:LEU58 2.8 30.0 1.0 CD A:GLU44 3.1 30.0 1.0 HB3 A:ASP41 3.1 30.0 1.0 HD22 A:ASN57 3.1 30.0 1.0 HA2 A:GLY60 3.4 30.0 1.0 HA A:ASP43 3.4 30.0 1.0 CG A:ASN57 3.6 30.0 1.0 N A:GLY60 3.6 30.0 1.0 CG A:ASP41 3.7 30.0 1.0 ND2 A:ASN57 3.7 30.0 1.0 H A:GLU44 3.7 30.0 1.0 H A:LEU58 3.8 30.0 1.0 CB A:ASP41 3.9 30.0 1.0 C A:ILE42 3.9 30.0 1.0 C A:LEU58 4.0 30.0 1.0 HB3 A:TYR62 4.0 30.0 1.0 CA A:GLY60 4.1 30.0 1.0 HA A:GLU59 4.2 30.0 1.0 HZ A:PHE31 4.2 30.0 1.0 HD1 A:TYR62 4.2 30.0 1.0 CA A:ASP43 4.4 30.0 1.0 C A:ASP41 4.5 30.0 1.0 N A:LEU58 4.6 30.0 1.0 CG A:GLU44 4.6 30.0 1.0 HB2 A:ASP41 4.6 30.0 1.0 O A:ASP41 4.6 30.0 1.0 N A:GLU44 4.6 30.0 1.0 N A:ILE42 4.6 30.0 1.0 HG21 A:ILE42 4.6 30.0 1.0 CZ A:PHE31 4.6 30.0 1.0 N A:ASP43 4.6 30.0 1.0 HD21 A:ASN57 4.7 30.0 1.0 C A:GLU59 4.7 30.0 1.0 H A:TYR62 4.8 30.0 1.0 HA3 A:GLY60 4.8 30.0 1.0 CA A:ASP41 4.8 30.0 1.0 CA A:GLU59 4.8 30.0 1.0 OD1 A:ASP41 4.8 30.0 1.0 N A:GLU59 4.9 30.0 1.0 H A:ILE42 4.9 30.0 1.0 HE2 A:PHE31 4.9 30.0 1.0 CD1 A:TYR62 4.9 30.0 1.0 CA A:LEU58 4.9 30.0 1.0 HG22 A:ILE42 4.9 30.0 1.0 HG2 A:GLU44 5.0 30.0 1.0 CA A:ILE42 5.0 30.0 1.0 H A:ASP41 5.0 30.0 1.0

N.D.Kurniawan, K.Aliabadizadeh, I.M.Brereton, P.A.Kroon, R.Smith. uc(Nmr) Structure and Backbone Dynamics of A Concatemer of Epidermal Growth Factor Homology Modules of the Human Low-Density Lipoprotein Receptor. J.Mol.Biol. V. 311 341 2001.
ISSN: ISSN 0022-2836
PubMed: 11478865
DOI: 10.1006/JMBI.2001.4867