Calcium in PDB 1j1t: Alginate Lyase From Alteromonas Sp.272

All present enzymatic activity of Alginate Lyase From Alteromonas Sp.272:
4.2.2.3;

The structure of Alginate Lyase From Alteromonas Sp.272, PDB code: 1j1t was solved by H.Motoshima, Y.Iwatomo, K.Watanabe, T.Oda, T.Muramatsu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.80 / 2.00
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	46.200, 46.200, 387.200, 90.00, 90.00, 120.00
R / Rfree (%)	19.4 / 24.8

The binding sites of Calcium atom in the Alginate Lyase From Alteromonas Sp.272 (pdb code 1j1t). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Alginate Lyase From Alteromonas Sp.272, PDB code: 1j1t:

Calcium binding site 1 out of 1 in the Alginate Lyase From Alteromonas Sp.272


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Alginate Lyase From Alteromonas Sp.272 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca301 b:15.1 occ:1.00 O A:VAL116 2.5 12.0 1.0 O A:ILE121 2.5 6.9 1.0 OD2 A:ASP114 2.5 10.8 1.0 OD1 A:ASP106 2.5 11.0 1.0 OD1 A:ASN119 2.6 14.8 1.0 O A:HOH401 2.6 8.8 1.0 CG A:ASN119 3.4 16.1 1.0 C A:VAL116 3.5 13.3 1.0 CG A:ASP114 3.5 13.1 1.0 C A:ILE121 3.6 8.6 1.0 CG A:ASP106 3.6 12.0 1.0 N A:VAL116 3.8 13.6 1.0 ND2 A:ASN119 3.8 14.6 1.0 CA A:ASP106 3.9 10.4 1.0 N A:ILE121 4.1 11.0 1.0 CA A:VAL116 4.1 13.7 1.0 CB A:ILE121 4.2 10.0 1.0 CA A:ILE121 4.2 9.9 1.0 C A:ASP106 4.3 10.3 1.0 CB A:ASP114 4.3 12.2 1.0 CB A:ASP106 4.3 9.2 1.0 CB A:VAL116 4.3 13.9 1.0 OD1 A:ASP114 4.4 13.9 1.0 O A:THR107 4.4 12.9 1.0 N A:ASN119 4.4 14.1 1.0 OD2 A:ASP123 4.5 9.8 1.0 N A:ALA117 4.5 12.8 1.0 OD2 A:ASP106 4.6 9.3 1.0 CB A:ASN119 4.6 15.0 1.0 N A:PHE122 4.6 7.2 1.0 N A:THR107 4.6 9.9 1.0 O A:ASP106 4.7 10.4 1.0 CA A:ALA117 4.8 11.9 1.0 C A:ALA117 4.8 13.6 1.0 CG2 A:ILE121 4.8 9.7 1.0 O A:SER105 4.8 9.3 1.0 CA A:PHE122 4.8 8.1 1.0 N A:SER115 4.9 12.7 1.0 N A:ASN118 4.9 13.4 1.0 CA A:ASN119 4.9 14.2 1.0 N A:GLY120 4.9 13.5 1.0 C A:SER115 4.9 14.4 1.0

H.Motoshima, Y.Iwatomo, K.Watanabe, T.Oda, T.Muramatsu. Crystal Strucutre of Alginate Lyase From Alteromonas Sp.272 To Be Published.