Calcium in PDB 1j83: Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans

All present enzymatic activity of Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans:
3.2.1.4;

The structure of Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans, PDB code: 1j83 was solved by V.Notenboom, A.B.Boraston, P.Chiu, A.C.J.Freelove, D.G.Kilburn, D.R.Rose, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.54 / 1.70
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	131.264, 37.678, 71.234, 90.00, 91.93, 90.00
R / Rfree (%)	19.8 / 21.9

The binding sites of Calcium atom in the Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans (pdb code 1j83). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans, PDB code: 1j83:
Jump to Calcium binding site number: 1; 2;

Calcium binding site 1 out of 2 in the Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca4001 b:2.0 occ:1.00 O A:ASP1040 2.3 7.7 1.0 O A:HOH3022 2.4 12.0 1.0 O A:ASN1067 2.4 10.3 1.0 OD1 A:ASN1042 2.4 7.9 1.0 O A:HOH3018 2.5 8.3 1.0 OD2 A:ASP1200 2.5 7.4 1.0 OD1 A:ASP1200 2.6 7.5 1.0 CG A:ASP1200 2.9 7.5 1.0 CG A:ASN1042 3.5 8.2 1.0 C A:ASP1040 3.5 7.7 1.0 C A:ASN1067 3.6 10.5 1.0 CB A:ASN1067 3.9 11.6 1.0 ND2 A:ASN1042 4.0 8.5 1.0 O A:HOH3230 4.2 20.3 1.0 CA A:ASP1040 4.2 7.8 1.0 N A:ASN1042 4.4 7.7 1.0 CA A:ASN1067 4.4 10.9 1.0 C A:PHE1041 4.4 7.7 1.0 OD1 A:ASN1201 4.4 8.2 1.0 CB A:ASP1040 4.4 7.9 1.0 CB A:ASP1200 4.4 7.5 1.0 O A:HOH3108 4.4 21.8 1.0 N A:PHE1041 4.5 7.6 1.0 N A:ALA1068 4.6 10.0 1.0 CB A:PHE1041 4.6 7.5 1.0 CB A:ASN1042 4.7 8.0 1.0 O A:PHE1041 4.7 7.5 1.0 CA A:ASN1042 4.7 8.0 1.0 CA A:PHE1041 4.7 7.5 1.0 CA A:ALA1068 4.7 9.7 1.0 CG A:ASN1201 5.0 8.1 1.0

Calcium binding site 2 out of 2 in the Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans within 5.0Å range: probe atom residue distance (Å) B Occ B:Ca4000 b:2.0 occ:1.00 O B:ASP2040 2.3 10.4 1.0 O B:ASN2067 2.3 11.7 1.0 O B:HOH3033 2.4 9.0 1.0 O B:HOH3107 2.5 12.0 1.0 OD1 B:ASN2042 2.5 10.6 1.0 OD2 B:ASP2200 2.5 9.2 1.0 OD1 B:ASP2200 2.5 9.2 1.0 CG B:ASP2200 2.9 9.2 1.0 C B:ASP2040 3.4 10.6 1.0 CG B:ASN2042 3.5 10.9 1.0 C B:ASN2067 3.6 11.8 1.0 CB B:ASN2067 3.9 12.6 1.0 ND2 B:ASN2042 4.0 11.1 1.0 CA B:ASP2040 4.2 10.8 1.0 C B:PHE2041 4.3 10.5 1.0 CA B:ASN2067 4.4 12.1 1.0 OD1 B:ASN2201 4.4 9.5 1.0 CB B:ASP2200 4.4 9.1 1.0 CB B:ASP2040 4.4 11.1 1.0 N B:ASN2042 4.4 10.7 1.0 N B:PHE2041 4.5 10.4 1.0 O B:PHE2041 4.5 10.4 1.0 N B:ALA2068 4.5 11.3 1.0 CA B:ALA2068 4.7 10.8 1.0 CB B:PHE2041 4.7 10.4 1.0 CA B:PHE2041 4.7 10.4 1.0 CB B:ASN2042 4.7 10.8 1.0 CA B:ASN2042 4.8 10.9 1.0 CG B:ASN2201 4.9 9.3 1.0 CB B:ALA2068 5.0 10.7 1.0

V.Notenboom, A.B.Boraston, P.Chiu, A.C.Freelove, D.G.Kilburn, D.R.Rose. Recognition of Cello-Oligosaccharides By A Family 17 Carbohydrate-Binding Module: An X-Ray Crystallographic, Thermodynamic and Mutagenic Study. J.Mol.Biol. V. 314 797 2001.
ISSN: ISSN 0022-2836
PubMed: 11733998
DOI: 10.1006/JMBI.2001.5153