Calcium in the structure of Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans (pdb 1j83)

The binding sites of Calcium atom in the structure of Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans (pdb code 1j83). This binding sites where shown with 5.0 Angstroms radius around Calcium atom. The 1j83 structure was solved by V.NOTENBOOM, A.B.BORASTON, P.CHIU, A.C.J.FREELOVE, D.G.KILBURN, D.R.ROSE, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 24.5-1.7 Space group C121 a (A) 131.264 b (A) 37.678 c (A) 71.234 alpha (°) 90.00 beta (°) 91.93 gamma (°) 90.00 Rfactor (%) 19.8 Rfree (%) 21.9 Calcium Binding Sites: Calcium binding site 1 out of 2 in 1j83 Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Calcium in the PDB 1j83. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Calcium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Asp1040, A: Phe1041, A: Asn1042, A: Asn1067, A: Ala1068, A: Asp1200, A: Asn1201, A: Hoh3018, A: Hoh3022, A: Hoh3108, A: Hoh3230, conact list: Atom Atom Distance (A) Ca O A:Asp1040 2.32 Ca CB A:Asp1040 4.40 Ca C A:Asp1040 3.49 Ca CA A:Asp1040 4.20 Ca O A:Phe1041 4.69 Ca N A:Phe1041 4.52 Ca CB A:Phe1041 4.61 Ca C A:Phe1041 4.38 Ca CA A:Phe1041 4.72 Ca N A:Asn1042 4.37 Ca CB A:Asn1042 4.68 Ca ND2 A:Asn1042 3.99 Ca OD1 A:Asn1042 2.45 Ca CG A:Asn1042 3.48 Ca CA A:Asn1042 4.71 Ca O A:Asn1067 2.40 Ca CB A:Asn1067 3.92 Ca C A:Asn1067 3.60 Ca CA A:Asn1067 4.38 Ca N A:Ala1068 4.60 Ca CA A:Ala1068 4.75 Ca CB A:Asp1200 4.40 Ca OD2 A:Asp1200 2.48 Ca OD1 A:Asp1200 2.60 Ca CG A:Asp1200 2.88 Ca OD1 A:Asn1201 4.40 Ca CG A:Asn1201 4.97 Ca O A:Hoh3018 2.46 Ca O A:Hoh3022 2.39 Ca O A:Hoh3108 4.44 Ca O A:Hoh3230 4.19 interactive model: Calcium binding site 2 out of 2 in 1j83 Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Calcium in the PDB 1j83. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Calcium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: B: Asp2040, B: Phe2041, B: Asn2042, B: Asn2067, B: Ala2068, B: Asp2200, B: Asn2201, B: Hoh3033, B: Hoh3107, conact list: Atom Atom Distance (A) Ca O B:Asp2040 2.29 Ca CB B:Asp2040 4.42 Ca C B:Asp2040 3.44 Ca CA B:Asp2040 4.16 Ca O B:Phe2041 4.48 Ca N B:Phe2041 4.47 Ca CB B:Phe2041 4.69 Ca C B:Phe2041 4.32 Ca CA B:Phe2041 4.70 Ca N B:Asn2042 4.43 Ca CB B:Asn2042 4.73 Ca ND2 B:Asn2042 4.01 Ca OD1 B:Asn2042 2.51 Ca CG B:Asn2042 3.52 Ca CA B:Asn2042 4.76 Ca O B:Asn2067 2.35 Ca CB B:Asn2067 3.89 Ca C B:Asn2067 3.55 Ca CA B:Asn2067 4.36 Ca N B:Ala2068 4.54 Ca CB B:Ala2068 4.99 Ca CA B:Ala2068 4.65 Ca CB B:Asp2200 4.41 Ca OD2 B:Asp2200 2.52 Ca OD1 B:Asp2200 2.54 Ca CG B:Asp2200 2.88 Ca OD1 B:Asn2201 4.36 Ca CG B:Asn2201 4.95 Ca O B:Hoh3033 2.37 Ca O B:Hoh3107 2.45 interactive model: