Atomistry » Calcium » PDB 1j1t-1jee » 1j84
Atomistry »
  Calcium »
    PDB 1j1t-1jee »
      1j84 »

Calcium in PDB 1j84: Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans with Bound Cellotetraose

Enzymatic activity of Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans with Bound Cellotetraose

All present enzymatic activity of Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans with Bound Cellotetraose:
3.2.1.4;

Protein crystallography data

The structure of Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans with Bound Cellotetraose, PDB code: 1j84 was solved by V.Notenboom, A.B.Boraston, P.Chiu, A.C.J.Freelove, D.G.Kilburn, D.R.Rose, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 22.22 / 2.02
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 69.095, 69.095, 143.590, 90.00, 90.00, 120.00
R / Rfree (%) 22.5 / 26.4

Calcium Binding Sites:

The binding sites of Calcium atom in the Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans with Bound Cellotetraose (pdb code 1j84). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans with Bound Cellotetraose, PDB code: 1j84:

Calcium binding site 1 out of 1 in 1j84

Go back to Calcium Binding Sites List in 1j84
Calcium binding site 1 out of 1 in the Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans with Bound Cellotetraose


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of FAM17 Carbohydrate Binding Module From Clostridium Cellulovorans with Bound Cellotetraose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca366

b:4.7
occ:1.00
 O A:ASN67 2.3 34.4 1.0
O A:ASP40 2.4 33.6 1.0
OD1 A:ASP200 2.4 35.1 1.0
OD1 A:ASN42 2.5 38.6 1.0
OD2 A:ASP200 2.7 37.2 1.0
CG A:ASP200 2.9 35.3 1.0
CG A:ASN42 3.4 36.6 1.0
C A:ASN67 3.5 35.2 1.0
C A:ASP40 3.5 32.8 1.0
ND2 A:ASN42 3.8 37.4 1.0
CB A:ASN67 3.9 37.4 1.0
CA A:ASP40 4.3 32.0 1.0
CB A:ASP200 4.3 33.7 1.0
CA A:ASN67 4.3 36.2 1.0
C A:PHE41 4.4 33.7 1.0
N A:ALA68 4.5 34.1 1.0
N A:ASN42 4.5 34.1 1.0
CB A:ASP40 4.5 32.4 1.0
OD1 A:ASN201 4.5 31.1 1.0
N A:PHE41 4.5 32.9 1.0
O A:HOH245 4.6 45.7 1.0
CA A:ALA68 4.6 33.1 1.0
O A:PHE41 4.6 33.7 1.0
CB A:PHE41 4.7 31.4 1.0
CB A:ASN42 4.7 35.0 1.0
CA A:PHE41 4.8 33.0 1.0
CA A:ASN42 4.8 35.0 1.0
ND2 A:ASN201 4.9 31.7 1.0
CG A:ASN201 5.0 32.1 1.0
CB A:ALA68 5.0 32.2 1.0

Reference:

V.Notenboom, A.B.Boraston, P.Chiu, A.C.Freelove, D.G.Kilburn, D.R.Rose. Recognition of Cello-Oligosaccharides By A Family 17 Carbohydrate-Binding Module: An X-Ray Crystallographic, Thermodynamic and Mutagenic Study. J.Mol.Biol. V. 314 797 2001.
ISSN: ISSN 0022-2836
PubMed: 11733998
DOI: 10.1006/JMBI.2001.5153
Page generated: Sat Dec 12 03:01:41 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy