Calcium in PDB 1jfk: Minimum Energy Representative Structure of A Calcium Bound Ef-Hand Protein From Entamoeba Histolytica

The binding sites of Calcium atom in the Minimum Energy Representative Structure of A Calcium Bound Ef-Hand Protein From Entamoeba Histolytica (pdb code 1jfk). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total 4 binding sites of Calcium where determined in the Minimum Energy Representative Structure of A Calcium Bound Ef-Hand Protein From Entamoeba Histolytica, PDB code: 1jfk:
Jump to Calcium binding site number: 1; 2; 3; 4;

Calcium binding site 1 out of 4 in the Minimum Energy Representative Structure of A Calcium Bound Ef-Hand Protein From Entamoeba Histolytica


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Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Minimum Energy Representative Structure of A Calcium Bound Ef-Hand Protein From Entamoeba Histolytica within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca147 b:0.0 occ:1.00 OE1 A:GLU21 2.7 0.0 1.0 OD1 A:ASP10 2.8 0.0 1.0 OE2 A:GLU21 2.8 0.0 1.0 O A:ALA16 2.8 0.0 1.0 OD1 A:ASN12 2.8 0.0 1.0 CG A:ASP10 3.0 0.0 1.0 OD2 A:ASP14 3.0 0.0 1.0 CD A:GLU21 3.1 0.0 1.0 HB2 A:ASN12 3.3 0.0 1.0 HA A:ASP10 3.4 0.0 1.0 HB2 A:ASP10 3.4 0.0 1.0 OD2 A:ASP10 3.5 0.0 1.0 CB A:ASP10 3.6 0.0 1.0 OD1 A:ASP14 3.6 0.0 1.0 HA A:VAL17 3.7 0.0 1.0 CG A:ASP14 3.7 0.0 1.0 CG A:ASN12 3.8 0.0 1.0 C A:ALA16 3.9 0.0 1.0 CA A:ASP10 4.0 0.0 1.0 H A:ALA16 4.0 0.0 1.0 CB A:ASN12 4.1 0.0 1.0 H A:ASN12 4.2 0.0 1.0 H A:ASP14 4.5 0.0 1.0 H A:GLY13 4.5 0.0 1.0 HB1 A:ALA16 4.6 0.0 1.0 CA A:VAL17 4.6 0.0 1.0 CG A:GLU21 4.6 0.0 1.0 HB3 A:ASP10 4.7 0.0 1.0 C A:ASP10 4.7 0.0 1.0 H A:GLY15 4.7 0.0 1.0 N A:VAL17 4.7 0.0 1.0 HB3 A:ASN12 4.8 0.0 1.0 HG21 A:VAL17 4.8 0.0 1.0 N A:ALA16 4.9 0.0 1.0 CA A:ALA16 4.9 0.0 1.0 N A:ASN12 5.0 0.0 1.0 ND2 A:ASN12 5.0 0.0 1.0

Calcium binding site 2 out of 4 in the Minimum Energy Representative Structure of A Calcium Bound Ef-Hand Protein From Entamoeba Histolytica


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Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 2 of Minimum Energy Representative Structure of A Calcium Bound Ef-Hand Protein From Entamoeba Histolytica within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca159 b:0.0 occ:1.00 HG23 A:ILE53 2.4 0.0 1.0 HD22 A:ASN50 2.7 0.0 1.0 OD1 A:ASP46 2.7 0.0 1.0 OE1 A:GLU57 2.8 0.0 1.0 OE2 A:GLU57 2.8 0.0 1.0 OD1 A:ASN50 2.8 0.0 1.0 O A:GLU52 2.8 0.0 1.0 HA A:ILE53 3.1 0.0 1.0 CD A:GLU57 3.1 0.0 1.0 OD1 A:ASP48 3.2 0.0 1.0 ND2 A:ASN50 3.3 0.0 1.0 CG A:ASN50 3.4 0.0 1.0 OD2 A:ASP48 3.4 0.0 1.0 CG2 A:ILE53 3.4 0.0 1.0 HA A:ASP46 3.5 0.0 1.0 CG A:ASP46 3.5 0.0 1.0 HG21 A:ILE53 3.6 0.0 1.0 CG A:ASP48 3.6 0.0 1.0 C A:GLU52 3.9 0.0 1.0 H A:ASN50 4.0 0.0 1.0 HG22 A:ILE53 4.0 0.0 1.0 CA A:ILE53 4.1 0.0 1.0 H A:GLY49 4.2 0.0 1.0 OD2 A:ASP46 4.2 0.0 1.0 HD21 A:ASN50 4.2 0.0 1.0 CB A:ILE53 4.3 0.0 1.0 CA A:ASP46 4.4 0.0 1.0 CB A:ASP46 4.4 0.0 1.0 N A:ILE53 4.5 0.0 1.0 H A:ALA47 4.6 0.0 1.0 H A:ASP48 4.6 0.0 1.0 H A:GLU52 4.6 0.0 1.0 HB2 A:ASP46 4.6 0.0 1.0 CG A:GLU57 4.6 0.0 1.0 HB A:ILE53 4.8 0.0 1.0 CB A:ASN50 4.9 0.0 1.0 N A:ASN50 5.0 0.0 1.0

Calcium binding site 3 out of 4 in the Minimum Energy Representative Structure of A Calcium Bound Ef-Hand Protein From Entamoeba Histolytica


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 3 of Minimum Energy Representative Structure of A Calcium Bound Ef-Hand Protein From Entamoeba Histolytica within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca171 b:0.0 occ:1.00 OE1 A:GLU96 2.7 0.0 1.0 O A:LYS91 2.8 0.0 1.0 OE2 A:GLU96 2.8 0.0 1.0 HB2 A:ASP89 2.8 0.0 1.0 CD A:GLU96 3.1 0.0 1.0 OD2 A:ASP89 3.4 0.0 1.0 HA A:LEU92 3.5 0.0 1.0 OD1 A:ASP87 3.6 0.0 1.0 HE1 A:TYR81 3.6 0.0 1.0 OD2 A:ASP87 3.6 0.0 1.0 OD2 A:ASP85 3.7 0.0 1.0 CB A:ASP89 3.7 0.0 1.0 HB3 A:ASP89 4.0 0.0 1.0 C A:LYS91 4.0 0.0 1.0 CG A:ASP87 4.0 0.0 1.0 CG A:ASP85 4.0 0.0 1.0 CG A:ASP89 4.0 0.0 1.0 HB3 A:LEU92 4.0 0.0 1.0 HB2 A:ASP85 4.1 0.0 1.0 CA A:LEU92 4.4 0.0 1.0 OD1 A:ASP85 4.4 0.0 1.0 HB2 A:LEU92 4.4 0.0 1.0 H A:LYS91 4.4 0.0 1.0 CB A:LEU92 4.5 0.0 1.0 H A:ASP89 4.6 0.0 1.0 CB A:ASP85 4.6 0.0 1.0 CG A:GLU96 4.6 0.0 1.0 H A:GLY90 4.7 0.0 1.0 N A:LEU92 4.7 0.0 1.0 CE1 A:TYR81 4.7 0.0 1.0 OH A:TYR81 4.7 0.0 1.0 HA A:ASP85 4.7 0.0 1.0 N A:LYS91 5.0 0.0 1.0 CA A:ASP89 5.0 0.0 1.0

Calcium binding site 4 out of 4 in the Minimum Energy Representative Structure of A Calcium Bound Ef-Hand Protein From Entamoeba Histolytica


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 4 of Minimum Energy Representative Structure of A Calcium Bound Ef-Hand Protein From Entamoeba Histolytica within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca183 b:0.0 occ:1.00 HG23 A:ILE124 2.4 0.0 1.0 OD1 A:ASN119 2.7 0.0 1.0 O A:TYR123 2.7 0.0 1.0 OE1 A:GLU128 2.7 0.0 1.0 OE2 A:GLU128 2.8 0.0 1.0 CD A:GLU128 3.0 0.0 1.0 OD2 A:ASP121 3.1 0.0 1.0 HA A:ILE124 3.3 0.0 1.0 OD2 A:ASP117 3.4 0.0 1.0 CG2 A:ILE124 3.5 0.0 1.0 OD1 A:ASP121 3.8 0.0 1.0 CG A:ASN119 3.8 0.0 1.0 CG A:ASP121 3.8 0.0 1.0 C A:TYR123 3.9 0.0 1.0 CG A:ASP117 3.9 0.0 1.0 HG21 A:ILE124 4.0 0.0 1.0 OD1 A:ASP117 4.1 0.0 1.0 HG22 A:ILE124 4.1 0.0 1.0 CA A:ILE124 4.1 0.0 1.0 HB A:ILE124 4.2 0.0 1.0 CB A:ILE124 4.2 0.0 1.0 HB2 A:ASN119 4.2 0.0 1.0 H A:TYR123 4.3 0.0 1.0 CG A:GLU128 4.4 0.0 1.0 N A:ILE124 4.5 0.0 1.0 HG2 A:GLU128 4.5 0.0 1.0 CB A:ASN119 4.6 0.0 1.0 HA A:ASP117 4.7 0.0 1.0 ND2 A:ASN119 4.8 0.0 1.0 HD22 A:ASN119 4.8 0.0 1.0 HB2 A:ASP117 4.8 0.0 1.0 CB A:ASP117 4.9 0.0 1.0 HB3 A:ASN119 4.9 0.0 1.0

H.S.Atreya, S.C.Sahu, A.Bhattacharya, K.V.Chary, G.Govil. uc(Nmr) Derived Solution Structure of An Ef-Hand Calcium-Binding Protein From Entamoeba Histolytica. Biochemistry V. 40 14392 2001.
ISSN: ISSN 0006-2960
PubMed: 11724551
DOI: 10.1021/BI0114978