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Calcium in PDB 1jix: T4 Phage Bgt in Complex with CA2+

Enzymatic activity of T4 Phage Bgt in Complex with CA2+

All present enzymatic activity of T4 Phage Bgt in Complex with CA2+:
2.4.1.27;

Protein crystallography data

The structure of T4 Phage Bgt in Complex with CA2+, PDB code: 1jix was solved by S.Morera, L.Lariviere, J.Kurzeck, U.Aschke-Sonnenborn, P.S.Freemont, J.Janin, W.Ruger, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.65
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 47.943, 71.454, 62.010, 90.00, 91.36, 90.00
R / Rfree (%) 20 / 21.4

Calcium Binding Sites:

The binding sites of Calcium atom in the T4 Phage Bgt in Complex with CA2+ (pdb code 1jix). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the T4 Phage Bgt in Complex with CA2+, PDB code: 1jix:

Calcium binding site 1 out of 1 in 1jix

Go back to Calcium Binding Sites List in 1jix
Calcium binding site 1 out of 1 in the T4 Phage Bgt in Complex with CA2+


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of T4 Phage Bgt in Complex with CA2+ within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca600

b:39.1
occ:0.50
O A:HOH1022 2.4 39.1 1.0
O3B A:UDP500 2.6 14.6 1.0
O A:HOH1032 2.8 35.3 1.0
O A:HOH1033 3.1 12.2 0.5
OE1 A:GLU163 3.4 17.5 0.5
O A:HOH863 3.5 30.4 1.0
O A:HOH670 3.7 18.8 1.0
O A:HOH615 3.7 14.7 1.0
O5' A:UDP500 3.8 15.1 1.0
O A:HOH866 3.8 24.3 1.0
PB A:UDP500 4.0 12.9 1.0
CD A:GLU163 4.2 16.4 0.5
OE2 A:GLU163 4.3 17.9 0.5
C4' A:UDP500 4.3 12.3 1.0
O A:HOH864 4.3 27.9 1.0
C5' A:UDP500 4.4 12.1 1.0
OE2 A:GLU22 4.4 26.0 1.0
O2A A:UDP500 4.4 13.8 1.0
O1B A:UDP500 4.5 13.4 1.0
CB A:LEU268 4.6 18.1 1.0
O A:HOH811 4.6 32.2 1.0
PA A:UDP500 4.6 13.5 1.0
O3A A:UDP500 4.7 12.4 1.0
O A:HOH1033 4.9 11.4 0.5
O3' A:UDP500 4.9 13.9 1.0

Reference:

S.Morera, L.Lariviere, J.Kurzeck, U.Aschke-Sonnenborn, P.S.Freemont, J.Janin, W.Ruger. High Resolution Crystal Structures of T4 Phage Beta-Glucosyltransferase: Induced Fit and Effect of Substrate and Metal Binding. J.Mol.Biol. V. 311 569 2001.
ISSN: ISSN 0022-2836
PubMed: 11493010
DOI: 10.1006/JMBI.2001.4905
Page generated: Sat Dec 12 03:02:20 2020

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