Calcium in PDB 1jsa: Myristoylated Recoverin with Two Calciums Bound, uc(Nmr), 24 Structures
Calcium Binding Sites:
The binding sites of Calcium atom in the Myristoylated Recoverin with Two Calciums Bound, uc(Nmr), 24 Structures
(pdb code 1jsa). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 2 binding sites of Calcium where determined in the
Myristoylated Recoverin with Two Calciums Bound, uc(Nmr), 24 Structures, PDB code: 1jsa:
Jump to Calcium binding site number:
1;
2;
Calcium binding site 1 out
of 2 in 1jsa
Go back to
Calcium Binding Sites List in 1jsa
Calcium binding site 1 out
of 2 in the Myristoylated Recoverin with Two Calciums Bound, uc(Nmr), 24 Structures
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Myristoylated Recoverin with Two Calciums Bound, uc(Nmr), 24 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca500
b:0.0
occ:1.00
|
OD2
|
A:ASP77
|
2.5
|
0.0
|
1.0
|
OE2
|
A:GLU84
|
2.5
|
0.0
|
1.0
|
OD1
|
A:ASP73
|
2.5
|
0.0
|
1.0
|
OE1
|
A:GLU84
|
2.5
|
0.0
|
1.0
|
O
|
A:THR79
|
2.6
|
0.0
|
1.0
|
OD1
|
A:ASN75
|
2.6
|
0.0
|
1.0
|
HA
|
A:ASP73
|
2.6
|
0.0
|
1.0
|
CG
|
A:ASP77
|
2.8
|
0.0
|
1.0
|
CD
|
A:GLU84
|
2.8
|
0.0
|
1.0
|
HA
|
A:LEU80
|
2.9
|
0.0
|
1.0
|
HD22
|
A:LEU80
|
3.1
|
0.0
|
1.0
|
OD1
|
A:ASP77
|
3.3
|
0.0
|
1.0
|
CG
|
A:ASP73
|
3.4
|
0.0
|
1.0
|
HD22
|
A:ASN75
|
3.4
|
0.0
|
1.0
|
HB2
|
A:ASP77
|
3.4
|
0.0
|
1.0
|
H
|
A:ASP81
|
3.5
|
0.0
|
1.0
|
CB
|
A:ASP77
|
3.5
|
0.0
|
1.0
|
CA
|
A:ASP73
|
3.6
|
0.0
|
1.0
|
HB3
|
A:ASP77
|
3.6
|
0.0
|
1.0
|
CG
|
A:ASN75
|
3.6
|
0.0
|
1.0
|
C
|
A:THR79
|
3.6
|
0.0
|
1.0
|
CA
|
A:LEU80
|
3.9
|
0.0
|
1.0
|
ND2
|
A:ASN75
|
3.9
|
0.0
|
1.0
|
CD2
|
A:LEU80
|
4.0
|
0.0
|
1.0
|
HD21
|
A:LEU80
|
4.0
|
0.0
|
1.0
|
CB
|
A:ASP73
|
4.0
|
0.0
|
1.0
|
C
|
A:ASP73
|
4.0
|
0.0
|
1.0
|
H
|
A:THR79
|
4.1
|
0.0
|
1.0
|
O
|
A:ASP73
|
4.1
|
0.0
|
1.0
|
O
|
A:PHE72
|
4.2
|
0.0
|
1.0
|
OD2
|
A:ASP73
|
4.2
|
0.0
|
1.0
|
N
|
A:LEU80
|
4.2
|
0.0
|
1.0
|
H
|
A:ASN75
|
4.2
|
0.0
|
1.0
|
CG
|
A:GLU84
|
4.3
|
0.0
|
1.0
|
N
|
A:ASP81
|
4.3
|
0.0
|
1.0
|
HB2
|
A:ASP73
|
4.3
|
0.0
|
1.0
|
H
|
A:GLY78
|
4.4
|
0.0
|
1.0
|
HG
|
A:LEU80
|
4.5
|
0.0
|
1.0
|
OD2
|
A:ASP81
|
4.5
|
0.0
|
1.0
|
N
|
A:THR79
|
4.6
|
0.0
|
1.0
|
C
|
A:LEU80
|
4.7
|
0.0
|
1.0
|
HG3
|
A:GLU84
|
4.7
|
0.0
|
1.0
|
CG
|
A:LEU80
|
4.7
|
0.0
|
1.0
|
N
|
A:ASP73
|
4.7
|
0.0
|
1.0
|
CA
|
A:THR79
|
4.7
|
0.0
|
1.0
|
HG2
|
A:GLU84
|
4.8
|
0.0
|
1.0
|
HD23
|
A:LEU80
|
4.8
|
0.0
|
1.0
|
C
|
A:PHE72
|
4.9
|
0.0
|
1.0
|
HD21
|
A:ASN75
|
4.9
|
0.0
|
1.0
|
N
|
A:ALA74
|
4.9
|
0.0
|
1.0
|
HB2
|
A:ASP81
|
4.9
|
0.0
|
1.0
|
HD2
|
A:PHE72
|
5.0
|
0.0
|
1.0
|
CB
|
A:ASN75
|
5.0
|
0.0
|
1.0
|
CB
|
A:LEU80
|
5.0
|
0.0
|
1.0
|
CA
|
A:ASP77
|
5.0
|
0.0
|
1.0
|
HB3
|
A:ASP73
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 2 out
of 2 in 1jsa
Go back to
Calcium Binding Sites List in 1jsa
Calcium binding site 2 out
of 2 in the Myristoylated Recoverin with Two Calciums Bound, uc(Nmr), 24 Structures
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Myristoylated Recoverin with Two Calciums Bound, uc(Nmr), 24 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca501
b:0.0
occ:1.00
|
OE1
|
A:GLU120
|
2.5
|
0.0
|
1.0
|
OD1
|
A:ASN113
|
2.5
|
0.0
|
1.0
|
OE2
|
A:GLU120
|
2.5
|
0.0
|
1.0
|
O
|
A:THR115
|
2.5
|
0.0
|
1.0
|
OD1
|
A:ASP109
|
2.5
|
0.0
|
1.0
|
OD1
|
A:ASP111
|
2.5
|
0.0
|
1.0
|
H
|
A:ASN113
|
2.6
|
0.0
|
1.0
|
HB2
|
A:ASN113
|
2.6
|
0.0
|
1.0
|
CD
|
A:GLU120
|
2.7
|
0.0
|
1.0
|
CG
|
A:ASN113
|
3.1
|
0.0
|
1.0
|
HA
|
A:ILE116
|
3.2
|
0.0
|
1.0
|
CB
|
A:ASN113
|
3.2
|
0.0
|
1.0
|
CG
|
A:ASP111
|
3.3
|
0.0
|
1.0
|
N
|
A:ASN113
|
3.3
|
0.0
|
1.0
|
H
|
A:GLY112
|
3.3
|
0.0
|
1.0
|
CG
|
A:ASP109
|
3.3
|
0.0
|
1.0
|
C
|
A:THR115
|
3.6
|
0.0
|
1.0
|
OD2
|
A:ASP109
|
3.7
|
0.0
|
1.0
|
OD2
|
A:ASP111
|
3.7
|
0.0
|
1.0
|
H
|
A:THR115
|
3.7
|
0.0
|
1.0
|
CA
|
A:ASN113
|
3.8
|
0.0
|
1.0
|
N
|
A:GLY112
|
4.0
|
0.0
|
1.0
|
HA
|
A:ASP109
|
4.1
|
0.0
|
1.0
|
CA
|
A:ILE116
|
4.1
|
0.0
|
1.0
|
ND2
|
A:ASN113
|
4.1
|
0.0
|
1.0
|
HB3
|
A:ASN113
|
4.2
|
0.0
|
1.0
|
C
|
A:GLY112
|
4.2
|
0.0
|
1.0
|
CG
|
A:GLU120
|
4.2
|
0.0
|
1.0
|
HG1
|
A:THR115
|
4.3
|
0.0
|
1.0
|
HB2
|
A:ASP111
|
4.3
|
0.0
|
1.0
|
N
|
A:ILE116
|
4.3
|
0.0
|
1.0
|
HA2
|
A:GLY112
|
4.3
|
0.0
|
1.0
|
C
|
A:ASN113
|
4.4
|
0.0
|
1.0
|
H
|
A:SER117
|
4.4
|
0.0
|
1.0
|
CB
|
A:ASP111
|
4.4
|
0.0
|
1.0
|
CA
|
A:GLY112
|
4.4
|
0.0
|
1.0
|
N
|
A:THR115
|
4.5
|
0.0
|
1.0
|
HG2
|
A:GLU120
|
4.5
|
0.0
|
1.0
|
HD22
|
A:ASN113
|
4.5
|
0.0
|
1.0
|
CB
|
A:ASP109
|
4.6
|
0.0
|
1.0
|
CA
|
A:THR115
|
4.7
|
0.0
|
1.0
|
HG3
|
A:GLU120
|
4.7
|
0.0
|
1.0
|
HG12
|
A:ILE116
|
4.7
|
0.0
|
1.0
|
CA
|
A:ASP109
|
4.7
|
0.0
|
1.0
|
H
|
A:ASP111
|
4.7
|
0.0
|
1.0
|
HA
|
A:ASN113
|
4.8
|
0.0
|
1.0
|
OG1
|
A:THR115
|
4.8
|
0.0
|
1.0
|
O
|
A:ASN113
|
4.8
|
0.0
|
1.0
|
HD21
|
A:ASN113
|
4.8
|
0.0
|
1.0
|
C
|
A:ILE116
|
4.8
|
0.0
|
1.0
|
N
|
A:SER117
|
4.8
|
0.0
|
1.0
|
C
|
A:ASP111
|
4.9
|
0.0
|
1.0
|
H
|
A:GLY114
|
4.9
|
0.0
|
1.0
|
N
|
A:GLY114
|
4.9
|
0.0
|
1.0
|
HG13
|
A:ILE116
|
4.9
|
0.0
|
1.0
|
HB2
|
A:GLU120
|
5.0
|
0.0
|
1.0
|
|
Reference:
J.B.Ames,
R.Ishima,
T.Tanaka,
J.I.Gordon,
L.Stryer,
M.Ikura.
Molecular Mechanics of Calcium-Myristoyl Switches. Nature V. 389 198 1997.
ISSN: ISSN 0028-0836
PubMed: 9296500
DOI: 10.1038/38310
Page generated: Thu Jul 11 10:53:45 2024
|