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Calcium in PDB 1jx6: Crystal Structure of Luxp From Vibrio Harveyi Complexed with Autoinducer-2

Protein crystallography data

The structure of Crystal Structure of Luxp From Vibrio Harveyi Complexed with Autoinducer-2, PDB code: 1jx6 was solved by X.Chen, S.Schauder, N.Potier, A.Van Dorsselaer, I.Pelczer, B.L.Bassler, F.M.Hughson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.58 / 1.50
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 44.268, 77.467, 52.008, 90.00, 96.37, 90.00
R / Rfree (%) 21.4 / 23.9

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of Luxp From Vibrio Harveyi Complexed with Autoinducer-2 (pdb code 1jx6). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of Luxp From Vibrio Harveyi Complexed with Autoinducer-2, PDB code: 1jx6:

Calcium binding site 1 out of 1 in 1jx6

Go back to Calcium Binding Sites List in 1jx6
Calcium binding site 1 out of 1 in the Crystal Structure of Luxp From Vibrio Harveyi Complexed with Autoinducer-2


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of Luxp From Vibrio Harveyi Complexed with Autoinducer-2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca401

b:50.1
occ:1.00
O A:HOH677 2.2 34.5 1.0
OD2 A:ASP149 2.2 42.3 1.0
O A:HOH684 2.2 38.6 1.0
OD1 A:ASP149 2.4 39.9 1.0
CG A:ASP149 2.6 39.1 1.0
CB A:ASP149 4.1 34.8 1.0
O A:HOH671 4.3 45.1 1.0
O A:GLU145 4.5 24.0 1.0
O A:HOH570 4.6 45.9 1.0
CB A:GLU145 4.7 32.7 1.0
CA A:GLU145 5.0 27.6 1.0

Reference:

X.Chen, S.Schauder, N.Potier, A.Van Dorsselaer, I.Pelczer, B.L.Bassler, F.M.Hughson. Structural Identification of A Bacterial Quorum-Sensing Signal Containing Boron. Nature V. 415 545 2002.
ISSN: ISSN 0028-0836
PubMed: 11823863
DOI: 10.1038/415545A
Page generated: Sat Dec 12 03:02:52 2020

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