Calcium in PDB 1kv9: Structure at 1.9 A Resolution of A Quinohemoprotein Alcohol Dehydrogenase From Pseudomonas Putida HK5

The structure of Structure at 1.9 A Resolution of A Quinohemoprotein Alcohol Dehydrogenase From Pseudomonas Putida HK5, PDB code: 1kv9 was solved by Z.-W.Chen, K.Matsushita, T.Yamashita, T.Fujii, H.Toyama, O.Adachi, H.D.Bellamy, F.S.Mathews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 1.90
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	54.807, 57.437, 67.523, 89.65, 69.34, 68.39
R / Rfree (%)	15.4 / 18.9

The structure of Structure at 1.9 A Resolution of A Quinohemoprotein Alcohol Dehydrogenase From Pseudomonas Putida HK5 also contains other interesting chemical elements:

Iron

(Fe)

1 atom

The binding sites of Calcium atom in the Structure at 1.9 A Resolution of A Quinohemoprotein Alcohol Dehydrogenase From Pseudomonas Putida HK5 (pdb code 1kv9). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure at 1.9 A Resolution of A Quinohemoprotein Alcohol Dehydrogenase From Pseudomonas Putida HK5, PDB code: 1kv9:

Calcium binding site 1 out of 1 in the Structure at 1.9 A Resolution of A Quinohemoprotein Alcohol Dehydrogenase From Pseudomonas Putida HK5


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure at 1.9 A Resolution of A Quinohemoprotein Alcohol Dehydrogenase From Pseudomonas Putida HK5 within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca802 b:20.4 occ:1.00 O5 A:PQQ801 2.3 18.0 1.0 OE1 A:GLU173 2.4 15.9 1.0 O7A A:PQQ801 2.4 18.7 1.0 N6 A:PQQ801 2.5 17.6 1.0 OE2 A:GLU173 2.5 15.4 1.0 OD1 A:ASN250 2.6 16.2 1.0 OD2 A:ASP295 2.7 15.5 1.0 CD A:GLU173 2.8 16.4 1.0 C5 A:PQQ801 3.1 19.2 1.0 C6A A:PQQ801 3.3 17.4 1.0 C7X A:PQQ801 3.4 15.8 1.0 C7 A:PQQ801 3.4 17.6 1.0 CG A:ASN250 3.4 17.4 1.0 ND2 A:ASN250 3.7 16.4 1.0 CG A:ASP295 3.7 14.9 1.0 OD1 A:ASP295 3.9 17.3 1.0 O A:HOH1210 4.1 18.2 1.0 CG2 A:THR297 4.2 12.5 1.0 CG A:GLU173 4.3 15.2 1.0 NZ A:LYS322 4.3 13.9 1.0 O A:ACN803 4.5 31.5 1.0 C2 A:ACN803 4.5 30.3 1.0 O7B A:PQQ801 4.6 15.3 1.0 O A:HOH1034 4.6 16.5 1.0 C4 A:PQQ801 4.6 17.6 1.0 CB A:ASN250 4.7 15.9 1.0 C8 A:PQQ801 4.7 17.5 1.0 C9A A:PQQ801 4.7 16.8 1.0 NE1 A:TRP254 4.8 15.8 1.0 CB A:ALA172 4.8 15.1 1.0 NE1 A:TRP232 4.9 15.2 1.0

Z.W.Chen, K.Matsushita, T.Yamashita, T.A.Fujii, H.Toyama, O.Adachi, H.D.Bellamy, F.S.Mathews. Structure at 1.9 A Resolution of A Quinohemoprotein Alcohol Dehydrogenase From Pseudomonas Putida HK5. Structure V. 10 837 2002.
ISSN: ISSN 0969-2126
PubMed: 12057198
DOI: 10.1016/S0969-2126(02)00774-8