Atomistry » Calcium » PDB 1krf-1l3f » 1l0p
Atomistry »
  Calcium »
    PDB 1krf-1l3f »
      1l0p »

Calcium in PDB 1l0p: Crystal Structure Analysis of the Complex Between Psychrophilic Alpha Amylase From Pseudoalteromonas Haloplanctis and Nitrate

Enzymatic activity of Crystal Structure Analysis of the Complex Between Psychrophilic Alpha Amylase From Pseudoalteromonas Haloplanctis and Nitrate

All present enzymatic activity of Crystal Structure Analysis of the Complex Between Psychrophilic Alpha Amylase From Pseudoalteromonas Haloplanctis and Nitrate:
3.2.1.1;

Protein crystallography data

The structure of Crystal Structure Analysis of the Complex Between Psychrophilic Alpha Amylase From Pseudoalteromonas Haloplanctis and Nitrate, PDB code: 1l0p was solved by N.Aghajari, R.Haser, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.56 / 2.10
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 71.300, 138.400, 114.900, 90.00, 90.00, 90.00
R / Rfree (%) 14.6 / 18

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure Analysis of the Complex Between Psychrophilic Alpha Amylase From Pseudoalteromonas Haloplanctis and Nitrate (pdb code 1l0p). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure Analysis of the Complex Between Psychrophilic Alpha Amylase From Pseudoalteromonas Haloplanctis and Nitrate, PDB code: 1l0p:

Calcium binding site 1 out of 1 in 1l0p

Go back to Calcium Binding Sites List in 1l0p
Calcium binding site 1 out of 1 in the Crystal Structure Analysis of the Complex Between Psychrophilic Alpha Amylase From Pseudoalteromonas Haloplanctis and Nitrate


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure Analysis of the Complex Between Psychrophilic Alpha Amylase From Pseudoalteromonas Haloplanctis and Nitrate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca800

b:16.3
occ:1.00
 O A:HOH1091 2.3 12.3 1.0
OD1 A:ASN88 2.3 19.0 1.0
OD2 A:ASP144 2.4 13.3 1.0
O A:HIS178 2.4 13.7 1.0
O A:HOH1108 2.5 13.9 1.0
OD1 A:ASP144 2.6 18.9 1.0
O A:HOH1107 2.6 14.0 1.0
O A:GLN135 2.6 17.5 1.0
CG A:ASP144 2.8 16.1 1.0
CG A:ASN88 3.5 18.3 1.0
C A:GLN135 3.6 17.8 1.0
C A:HIS178 3.6 12.6 1.0
ND2 A:ASN88 4.1 15.3 1.0
CA A:GLN135 4.2 18.2 1.0
CB A:HIS178 4.3 12.4 1.0
O A:ASN88 4.3 18.7 1.0
CB A:ASP144 4.3 11.5 1.0
CG2 A:VAL179 4.4 8.9 1.0
CE1 A:HIS117 4.4 18.4 1.0
ND1 A:HIS117 4.4 17.6 1.0
N A:ASN136 4.5 15.9 1.0
CA A:HIS178 4.5 12.9 1.0
N A:VAL179 4.5 11.0 1.0
O A:LEU145 4.5 15.5 1.0
CA A:VAL179 4.5 11.0 1.0
CB A:ASN88 4.6 17.0 1.0
CA A:ASN136 4.7 16.7 1.0
O A:CYS137 4.8 15.6 1.0
O A:HOH1144 4.9 20.3 1.0
O A:VAL134 4.9 18.5 1.0
CA A:ASN88 4.9 17.1 1.0
CB A:GLN135 5.0 16.2 1.0

Reference:

N.Aghajari, G.Feller, C.Gerday, R.Haser. Structural Basis of Alpha-Amylase Activation By Chloride. Protein Sci. V. 11 1435 2002.
ISSN: ISSN 0961-8368
PubMed: 12021442
DOI: 10.1110/PS.0202602
Page generated: Thu Jul 11 11:45:08 2024

Last articles

Mg in 4Y52
Mg in 4Y30
Mg in 4Y2V
Mg in 4Y2X
Mg in 4Y2Y
Mg in 4Y2U
Mg in 4Y2T
Mg in 4Y2Q
Mg in 4Y2R
Mg in 4Y2S
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy