Calcium in PDB 1la0: Solution Structure of Calcium Saturated Cardiac Troponin C in the Troponin C-Troponin I Complex
Calcium Binding Sites:
The binding sites of Calcium atom in the Solution Structure of Calcium Saturated Cardiac Troponin C in the Troponin C-Troponin I Complex
(pdb code 1la0). This binding sites where shown within
5.0 Angstroms radius around Calcium atom.
In total 3 binding sites of Calcium where determined in the
Solution Structure of Calcium Saturated Cardiac Troponin C in the Troponin C-Troponin I Complex, PDB code: 1la0:
Jump to Calcium binding site number:
1;
2;
3;
Calcium binding site 1 out
of 3 in 1la0
Go back to
Calcium Binding Sites List in 1la0
Calcium binding site 1 out
of 3 in the Solution Structure of Calcium Saturated Cardiac Troponin C in the Troponin C-Troponin I Complex
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 1 of Solution Structure of Calcium Saturated Cardiac Troponin C in the Troponin C-Troponin I Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca162
b:0.0
occ:1.00
|
HB3
|
A:ASP67
|
2.1
|
0.0
|
1.0
|
OD2
|
A:ASP65
|
2.4
|
0.0
|
1.0
|
HB2
|
A:ASP67
|
2.7
|
0.0
|
1.0
|
CB
|
A:ASP67
|
2.9
|
0.0
|
1.0
|
OD1
|
A:ASP65
|
3.0
|
0.0
|
1.0
|
CG
|
A:ASP65
|
3.1
|
0.0
|
1.0
|
HB2
|
A:SER69
|
3.1
|
0.0
|
1.0
|
OE1
|
A:GLU76
|
3.3
|
0.0
|
1.0
|
H
|
A:GLY68
|
3.6
|
0.0
|
1.0
|
OE2
|
A:GLU76
|
3.6
|
0.0
|
1.0
|
OD2
|
A:ASP67
|
3.6
|
0.0
|
1.0
|
O
|
A:THR71
|
3.6
|
0.0
|
1.0
|
H
|
A:SER69
|
3.6
|
0.0
|
1.0
|
H
|
A:ASP67
|
3.7
|
0.0
|
1.0
|
CG
|
A:ASP67
|
3.7
|
0.0
|
1.0
|
CD
|
A:GLU76
|
3.8
|
0.0
|
1.0
|
HB2
|
A:ASP73
|
3.9
|
0.0
|
1.0
|
HG
|
A:SER69
|
4.0
|
0.0
|
1.0
|
CA
|
A:ASP67
|
4.1
|
0.0
|
1.0
|
N
|
A:ASP67
|
4.1
|
0.0
|
1.0
|
H
|
A:GLU66
|
4.1
|
0.0
|
1.0
|
CB
|
A:SER69
|
4.2
|
0.0
|
1.0
|
H
|
A:THR71
|
4.3
|
0.0
|
1.0
|
HG1
|
A:THR71
|
4.3
|
0.0
|
1.0
|
N
|
A:GLY68
|
4.3
|
0.0
|
1.0
|
OG1
|
A:THR71
|
4.4
|
0.0
|
1.0
|
N
|
A:SER69
|
4.5
|
0.0
|
1.0
|
OG
|
A:SER69
|
4.5
|
0.0
|
1.0
|
CB
|
A:ASP65
|
4.5
|
0.0
|
1.0
|
C
|
A:ASP67
|
4.7
|
0.0
|
1.0
|
C
|
A:THR71
|
4.7
|
0.0
|
1.0
|
HB3
|
A:SER69
|
4.8
|
0.0
|
1.0
|
H
|
A:GLY70
|
4.8
|
0.0
|
1.0
|
HA
|
A:ASP65
|
4.8
|
0.0
|
1.0
|
N
|
A:GLU66
|
4.8
|
0.0
|
1.0
|
OD1
|
A:ASP67
|
4.9
|
0.0
|
1.0
|
HB2
|
A:ASP65
|
4.9
|
0.0
|
1.0
|
HA
|
A:ASP67
|
4.9
|
0.0
|
1.0
|
CB
|
A:ASP73
|
5.0
|
0.0
|
1.0
|
|
Calcium binding site 2 out
of 3 in 1la0
Go back to
Calcium Binding Sites List in 1la0
Calcium binding site 2 out
of 3 in the Solution Structure of Calcium Saturated Cardiac Troponin C in the Troponin C-Troponin I Complex
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 2 of Solution Structure of Calcium Saturated Cardiac Troponin C in the Troponin C-Troponin I Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca163
b:0.0
occ:1.00
|
OD1
|
A:ASP109
|
1.9
|
1.9
|
1.0
|
OE1
|
A:GLU116
|
2.0
|
1.6
|
1.0
|
CG
|
A:ASP109
|
2.2
|
1.6
|
1.0
|
OE2
|
A:GLU116
|
2.2
|
1.9
|
1.0
|
CD
|
A:GLU116
|
2.4
|
1.2
|
1.0
|
OD2
|
A:ASP109
|
2.4
|
2.3
|
1.0
|
H
|
A:ASP109
|
2.4
|
1.1
|
1.0
|
OD1
|
A:ASP105
|
2.4
|
1.4
|
1.0
|
H
|
A:LYS106
|
2.4
|
0.9
|
1.0
|
H
|
A:ASN107
|
2.8
|
1.1
|
1.0
|
OD1
|
A:ASN107
|
2.9
|
1.8
|
1.0
|
HA
|
A:ASP105
|
3.0
|
0.8
|
1.0
|
CG
|
A:ASP105
|
3.1
|
1.0
|
1.0
|
N
|
A:ASP109
|
3.3
|
1.2
|
1.0
|
CB
|
A:ASP109
|
3.4
|
1.3
|
1.0
|
N
|
A:LYS106
|
3.4
|
0.9
|
1.0
|
HB3
|
A:ASP109
|
3.5
|
1.7
|
1.0
|
O
|
A:TYR111
|
3.5
|
0.9
|
1.0
|
OD2
|
A:ASP105
|
3.6
|
1.7
|
1.0
|
H
|
A:TYR111
|
3.7
|
1.0
|
1.0
|
N
|
A:ASN107
|
3.8
|
1.2
|
1.0
|
H
|
A:ALA108
|
3.8
|
1.2
|
1.0
|
CA
|
A:ASP105
|
3.8
|
0.9
|
1.0
|
HB2
|
A:LYS106
|
3.9
|
1.0
|
1.0
|
CG
|
A:GLU116
|
3.9
|
1.0
|
1.0
|
CA
|
A:ASP109
|
3.9
|
1.3
|
1.0
|
CG
|
A:ASN107
|
3.9
|
1.4
|
1.0
|
H
|
A:GLY110
|
4.0
|
1.1
|
1.0
|
HA
|
A:ILE112
|
4.0
|
0.8
|
1.0
|
N
|
A:ALA108
|
4.0
|
1.2
|
1.0
|
C
|
A:TYR111
|
4.0
|
0.8
|
1.0
|
C
|
A:ASP105
|
4.1
|
1.0
|
1.0
|
CB
|
A:ASP105
|
4.1
|
1.0
|
1.0
|
HB2
|
A:ASP109
|
4.2
|
1.6
|
1.0
|
HG2
|
A:GLU116
|
4.3
|
1.2
|
1.0
|
N
|
A:TYR111
|
4.3
|
1.0
|
1.0
|
HD22
|
A:ASN107
|
4.4
|
2.1
|
1.0
|
C
|
A:ALA108
|
4.4
|
1.2
|
1.0
|
HG3
|
A:GLU116
|
4.4
|
1.1
|
1.0
|
N
|
A:GLY110
|
4.4
|
1.1
|
1.0
|
C
|
A:ASN107
|
4.4
|
1.3
|
1.0
|
CA
|
A:LYS106
|
4.4
|
1.0
|
1.0
|
C
|
A:ASP109
|
4.5
|
1.2
|
1.0
|
HA
|
A:ALA108
|
4.5
|
1.1
|
1.0
|
OD2
|
A:ASP113
|
4.5
|
2.3
|
1.0
|
HB2
|
A:GLU116
|
4.5
|
1.0
|
1.0
|
CA
|
A:ALA108
|
4.5
|
1.2
|
1.0
|
ND2
|
A:ASN107
|
4.6
|
1.8
|
1.0
|
C
|
A:LYS106
|
4.6
|
1.2
|
1.0
|
N
|
A:ILE112
|
4.6
|
0.7
|
1.0
|
CA
|
A:ASN107
|
4.6
|
1.4
|
1.0
|
CB
|
A:LYS106
|
4.6
|
1.0
|
1.0
|
CA
|
A:TYR111
|
4.7
|
0.9
|
1.0
|
CB
|
A:GLU116
|
4.7
|
0.9
|
1.0
|
HB2
|
A:ASP105
|
4.7
|
1.1
|
1.0
|
CA
|
A:ILE112
|
4.8
|
0.7
|
1.0
|
HA
|
A:TYR111
|
4.8
|
0.8
|
1.0
|
HB3
|
A:GLU116
|
4.8
|
1.0
|
1.0
|
HA
|
A:ASP109
|
4.9
|
1.3
|
1.0
|
HB3
|
A:ASP105
|
4.9
|
1.1
|
1.0
|
CB
|
A:ASN107
|
4.9
|
1.6
|
1.0
|
|
Calcium binding site 3 out
of 3 in 1la0
Go back to
Calcium Binding Sites List in 1la0
Calcium binding site 3 out
of 3 in the Solution Structure of Calcium Saturated Cardiac Troponin C in the Troponin C-Troponin I Complex
Mono view
Stereo pair view
|
A full contact list of Calcium with other atoms in the Ca binding
site number 3 of Solution Structure of Calcium Saturated Cardiac Troponin C in the Troponin C-Troponin I Complex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Ca164
b:0.0
occ:1.00
|
HB2
|
A:ASN143
|
1.8
|
1.8
|
1.0
|
OD1
|
A:ASP145
|
2.1
|
1.4
|
1.0
|
OE2
|
A:GLU152
|
2.1
|
1.9
|
1.0
|
OD1
|
A:ASP141
|
2.4
|
1.4
|
1.0
|
H
|
A:ASN143
|
2.5
|
0.9
|
1.0
|
CB
|
A:ASN143
|
2.8
|
1.1
|
1.0
|
H
|
A:ASP145
|
2.9
|
0.9
|
1.0
|
H
|
A:ASN144
|
3.1
|
0.9
|
1.0
|
CD
|
A:GLU152
|
3.1
|
1.3
|
1.0
|
N
|
A:ASN143
|
3.3
|
0.9
|
1.0
|
CG
|
A:ASP145
|
3.3
|
1.0
|
1.0
|
OD1
|
A:ASN143
|
3.4
|
2.1
|
1.0
|
CG
|
A:ASP141
|
3.4
|
0.8
|
1.0
|
OE1
|
A:GLU152
|
3.4
|
1.9
|
1.0
|
HB3
|
A:ASN143
|
3.5
|
1.4
|
1.0
|
CA
|
A:ASN143
|
3.5
|
1.1
|
1.0
|
O
|
A:ARG147
|
3.5
|
0.7
|
1.0
|
N
|
A:ASN144
|
3.5
|
1.0
|
1.0
|
CG
|
A:ASN143
|
3.6
|
1.5
|
1.0
|
H
|
A:LYS142
|
3.6
|
0.8
|
1.0
|
OD2
|
A:ASP141
|
3.7
|
1.5
|
1.0
|
OD2
|
A:ASP149
|
3.7
|
1.5
|
1.0
|
C
|
A:ASN143
|
3.8
|
1.1
|
1.0
|
HA
|
A:ILE148
|
3.8
|
0.5
|
1.0
|
N
|
A:ASP145
|
3.9
|
1.0
|
1.0
|
HB3
|
A:ASP145
|
4.0
|
1.1
|
1.0
|
OD2
|
A:ASP145
|
4.2
|
1.5
|
1.0
|
HD13
|
A:ILE148
|
4.2
|
1.7
|
1.0
|
CB
|
A:ASP145
|
4.2
|
1.1
|
1.0
|
N
|
A:LYS142
|
4.3
|
0.7
|
1.0
|
HA
|
A:ASP141
|
4.4
|
0.6
|
1.0
|
CG
|
A:GLU152
|
4.4
|
0.9
|
1.0
|
HA
|
A:ASN143
|
4.5
|
1.2
|
1.0
|
C
|
A:LYS142
|
4.5
|
0.8
|
1.0
|
CA
|
A:ASN144
|
4.5
|
1.1
|
1.0
|
C
|
A:ARG147
|
4.6
|
0.7
|
1.0
|
HG3
|
A:GLU152
|
4.6
|
1.5
|
1.0
|
HA
|
A:ASN144
|
4.7
|
1.0
|
1.0
|
O
|
A:ASN143
|
4.7
|
1.2
|
1.0
|
HG2
|
A:GLU152
|
4.7
|
1.2
|
1.0
|
C
|
A:ASN144
|
4.7
|
1.1
|
1.0
|
CA
|
A:ILE148
|
4.7
|
0.5
|
1.0
|
CB
|
A:ASP141
|
4.7
|
0.7
|
1.0
|
CA
|
A:ASP145
|
4.8
|
1.0
|
1.0
|
H
|
A:ARG147
|
4.8
|
0.8
|
1.0
|
CG
|
A:ASP149
|
4.8
|
0.8
|
1.0
|
ND2
|
A:ASN143
|
4.8
|
2.0
|
1.0
|
H
|
A:GLY146
|
4.8
|
1.0
|
1.0
|
HB2
|
A:LYS142
|
4.9
|
0.9
|
1.0
|
HG3
|
A:ARG147
|
4.9
|
1.6
|
1.0
|
CA
|
A:ASP141
|
4.9
|
0.6
|
1.0
|
C
|
A:ASP141
|
5.0
|
0.6
|
1.0
|
CA
|
A:LYS142
|
5.0
|
0.7
|
1.0
|
|
Reference:
A.Dvoretsky,
E.M.Abusamhadneh,
J.W.Howarth,
P.R.Rosevear.
Solution Structure of Calcium-Saturated Cardiac Troponin C Bound to Cardiac Troponin I. J.Biol.Chem. V. 277 38565 2002.
ISSN: ISSN 0021-9258
PubMed: 12147696
DOI: 10.1074/JBC.M205306200
Page generated: Thu Jul 11 11:49:16 2024
|