Atomistry » Calcium » PDB 1l3w-1lkv » 1lhn
Atomistry »
  Calcium »
    PDB 1l3w-1lkv »
      1lhn »

Calcium in PDB 1lhn: Crystal Structure of the N-Terminal Lg-Domain of Shbg in Complex with 5ALPHA-Androstane-3BETA,17ALPHA-Diol

Protein crystallography data

The structure of Crystal Structure of the N-Terminal Lg-Domain of Shbg in Complex with 5ALPHA-Androstane-3BETA,17ALPHA-Diol, PDB code: 1lhn was solved by I.Grishkovskaya, G.V.Avvakumov, G.L.Hammond, M.G.Catalano, Y.A.Muller, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.09 / 2.00
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 103.900, 103.900, 84.480, 90.00, 90.00, 120.00
R / Rfree (%) 19.8 / 23.9

Other elements in 1lhn:

The structure of Crystal Structure of the N-Terminal Lg-Domain of Shbg in Complex with 5ALPHA-Androstane-3BETA,17ALPHA-Diol also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Calcium Binding Sites:

The binding sites of Calcium atom in the Crystal Structure of the N-Terminal Lg-Domain of Shbg in Complex with 5ALPHA-Androstane-3BETA,17ALPHA-Diol (pdb code 1lhn). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of the N-Terminal Lg-Domain of Shbg in Complex with 5ALPHA-Androstane-3BETA,17ALPHA-Diol, PDB code: 1lhn:

Calcium binding site 1 out of 1 in 1lhn

Go back to Calcium Binding Sites List in 1lhn
Calcium binding site 1 out of 1 in the Crystal Structure of the N-Terminal Lg-Domain of Shbg in Complex with 5ALPHA-Androstane-3BETA,17ALPHA-Diol


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of the N-Terminal Lg-Domain of Shbg in Complex with 5ALPHA-Androstane-3BETA,17ALPHA-Diol within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca401

b:32.0
occ:1.00
O A:HOH511 2.2 36.3 1.0
OD2 A:ASP50 2.2 32.8 1.0
O A:ALA160 2.3 30.9 1.0
O A:GLU52 2.3 26.7 1.0
O A:HOH524 2.4 40.3 1.0
OD1 A:ASP50 2.5 31.0 1.0
O A:HOH506 2.5 36.7 1.0
CG A:ASP50 2.7 31.4 1.0
C A:ALA160 3.5 31.8 1.0
C A:GLU52 3.5 28.2 1.0
CA A:LEU161 4.1 34.6 1.0
CB A:ASP50 4.1 29.1 1.0
N A:LEU161 4.2 32.2 1.0
CA A:GLU52 4.3 28.4 1.0
N A:GLU52 4.4 28.2 1.0
O A:HOH534 4.4 50.6 1.0
N A:GLY53 4.5 27.8 1.0
O A:VAL158 4.5 27.9 1.0
CA A:ALA160 4.5 32.2 1.0
CA A:GLY53 4.5 27.4 1.0
N A:ASP162 4.6 35.8 1.0
CB A:GLU52 4.6 25.2 1.0
CB A:ALA160 4.6 31.1 1.0
CD1 A:LEU161 4.7 37.3 1.0
C A:LEU161 4.9 35.6 1.0
N A:ALA160 5.0 31.2 1.0

Reference:

I.Grishkovskaya, G.V.Avvakumov, G.L.Hammond, M.G.Catalano, Y.A.Muller. Steroid Ligands Bind Human Sex Hormone-Binding Globulin in Specific Orientations and Produce Distinct Changes in Protein Conformation J.Biol.Chem. V. 277 32086 2002.
ISSN: ISSN 0021-9258
PubMed: 12065592
DOI: 10.1074/JBC.M203999200
Page generated: Sat Dec 12 03:05:05 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy