Calcium in PDB 1lte: Structure of A Legume Lectin with An Ordered N-Linked Carbohydrate in Complex with Lactose

The structure of Structure of A Legume Lectin with An Ordered N-Linked Carbohydrate in Complex with Lactose, PDB code: 1lte was solved by B.Shaanan, H.Lis, N.Sharon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	N/A / 2.00
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	84.400, 73.050, 71.400, 90.00, 113.42, 90.00
R / Rfree (%)	19 / n/a

The structure of Structure of A Legume Lectin with An Ordered N-Linked Carbohydrate in Complex with Lactose also contains other interesting chemical elements:

Manganese

(Mn)

1 atom

The binding sites of Calcium atom in the Structure of A Legume Lectin with An Ordered N-Linked Carbohydrate in Complex with Lactose (pdb code 1lte). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Structure of A Legume Lectin with An Ordered N-Linked Carbohydrate in Complex with Lactose, PDB code: 1lte:

Calcium binding site 1 out of 1 in the Structure of A Legume Lectin with An Ordered N-Linked Carbohydrate in Complex with Lactose


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Structure of A Legume Lectin with An Ordered N-Linked Carbohydrate in Complex with Lactose within 5.0Å range: probe atom residue distance (Å) B Occ A:Ca290 b:13.2 occ:1.00 O A:HOH809 2.3 15.2 1.0 O A:HOH801 2.3 10.7 1.0 OD2 A:ASP136 2.4 12.8 1.0 OD1 A:ASN133 2.4 15.4 1.0 OD2 A:ASP129 2.5 14.7 1.0 OD1 A:ASP129 2.5 12.7 1.0 O A:PHE131 2.5 14.2 1.0 CG A:ASP129 2.8 13.3 1.0 CG A:ASP136 3.4 12.8 1.0 CG A:ASN133 3.5 13.6 1.0 C A:PHE131 3.7 16.0 1.0 OD1 A:ASP136 3.8 13.3 1.0 N A:ASN133 4.0 14.1 1.0 CB A:ASN133 4.1 15.8 1.0 MN A:MN289 4.2 14.6 1.0 CB A:ASP129 4.3 9.0 1.0 O A:HOH807 4.4 10.9 1.0 N A:PHE131 4.4 12.2 1.0 NE1 A:TRP135 4.4 13.6 1.0 CA A:PHE131 4.5 13.5 1.0 ND2 A:ASN133 4.6 14.6 1.0 N A:SER132 4.6 16.1 1.0 CB A:PHE131 4.6 11.2 1.0 CA A:GLY107 4.6 13.5 1.0 CA A:SER132 4.6 16.9 1.0 CB A:ASP136 4.7 13.8 1.0 O A:GLY107 4.7 13.8 1.0 CA A:ASN133 4.7 15.7 1.0 C A:SER132 4.8 16.6 1.0 O A:ASP89 4.8 12.8 1.0 OD1 A:ASP89 4.8 14.6 1.0 CD2 A:PHE131 4.9 16.6 1.0

B.Shaanan, H.Lis, N.Sharon. Structure of A Legume Lectin with An Ordered N-Linked Carbohydrate in Complex with Lactose. Science V. 254 862 1991.
ISSN: ISSN 0036-8075
PubMed: 1948067