Atomistry » Calcium » PDB 1lu1-1m8v » 1lvy
Atomistry »
  Calcium »
    PDB 1lu1-1m8v »
      1lvy »

Calcium in PDB 1lvy: Porcine Elastase

Enzymatic activity of Porcine Elastase

All present enzymatic activity of Porcine Elastase:
3.4.21.36;

Protein crystallography data

The structure of Porcine Elastase, PDB code: 1lvy was solved by M.Schiltz, T.Prange, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.87
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 51.637, 57.973, 75.320, 90.00, 90.00, 90.00
R / Rfree (%) 20.9 / 25.8

Calcium Binding Sites:

The binding sites of Calcium atom in the Porcine Elastase (pdb code 1lvy). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Porcine Elastase, PDB code: 1lvy:

Calcium binding site 1 out of 1 in 1lvy

Go back to Calcium Binding Sites List in 1lvy
Calcium binding site 1 out of 1 in the Porcine Elastase


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Porcine Elastase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ca280

b:16.9
occ:1.00
OE2 A:GLU80 2.1 10.3 1.0
O A:GLN75 2.2 20.3 1.0
O A:HOH426 2.3 22.7 1.0
O A:ASN72 2.3 11.3 1.0
OE1 A:GLU70 2.3 12.0 1.0
OD1 A:ASN77 2.4 15.1 1.0
OE2 A:GLU70 3.1 16.1 1.0
CD A:GLU70 3.1 14.1 1.0
CD A:GLU80 3.2 11.3 1.0
CG A:ASN77 3.4 16.2 1.0
C A:GLN75 3.4 25.6 1.0
C A:ASN72 3.4 9.3 1.0
N A:ASN77 3.8 17.8 1.0
CG A:GLU80 3.8 8.4 1.0
CB A:ASN77 3.9 13.9 1.0
N A:ASN72 3.9 10.0 1.0
CA A:ASN72 4.2 9.2 1.0
CA A:ASN76 4.2 24.2 1.0
N A:ASN76 4.3 21.6 1.0
OE1 A:GLU80 4.3 13.0 1.0
N A:GLN75 4.3 25.2 1.0
CB A:ASN72 4.4 13.0 1.0
ND2 A:ASN77 4.4 17.4 1.0
C A:ASN76 4.4 22.6 1.0
CA A:GLN75 4.4 27.2 1.0
CA A:ASN77 4.5 15.7 1.0
N A:LEU73 4.5 12.4 1.0
CG A:GLU70 4.5 9.7 1.0
N A:HIS71 4.5 10.1 1.0
CA A:LEU73 4.6 15.5 1.0
C A:LEU73 4.7 16.4 1.0
O A:LEU73 4.8 17.4 1.0
C A:HIS71 4.9 12.0 1.0
OH A:TYR82 5.0 25.0 1.0
CB A:GLN75 5.0 31.1 1.0

Reference:

M.Schiltz, W.Shepard, R.Fourme, T.Prange, E.De La Fortelle, G.Bricogne. High-Pressure Krypton Gas and Statistical Heavy-Atom Refinement: A Successful Combination of Tools For Macromolecular Structure Determination. Acta Crystallogr.,Sect.D V. 53 78 1997.
ISSN: ISSN 0907-4449
PubMed: 15299973
DOI: 10.1107/S0907444996009705
Page generated: Sat Dec 12 03:05:59 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy