Calcium in PDB 1lww: Borohydride-Trapped HOGG1 Intermediate Structure Co- Crystallized with 8-Bromoguanine

The structure of Borohydride-Trapped HOGG1 Intermediate Structure Co- Crystallized with 8-Bromoguanine, PDB code: 1lww was solved by J.C.Fromme, S.D.Bruner, W.Yang, M.Karplus, G.L.Verdine, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.10
Space group	P 65 2 2
Cell size a, b, c (Å), α, β, γ (°)	92.174, 92.174, 211.887, 90.00, 90.00, 120.00
R / Rfree (%)	23.6 / 25.7

The structure of Borohydride-Trapped HOGG1 Intermediate Structure Co- Crystallized with 8-Bromoguanine also contains other interesting chemical elements:

Bromine

(Br)

1 atom

The binding sites of Calcium atom in the Borohydride-Trapped HOGG1 Intermediate Structure Co- Crystallized with 8-Bromoguanine (pdb code 1lww). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Borohydride-Trapped HOGG1 Intermediate Structure Co- Crystallized with 8-Bromoguanine, PDB code: 1lww:

Calcium binding site 1 out of 1 in the Borohydride-Trapped HOGG1 Intermediate Structure Co- Crystallized with 8-Bromoguanine


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Borohydride-Trapped HOGG1 Intermediate Structure Co- Crystallized with 8-Bromoguanine within 5.0Å range: probe atom residue distance (Å) B Occ E:Ca216 b:38.4 occ:1.00 O E:HOH6 2.7 27.6 1.0 O E:HOH209 3.0 48.6 1.0 OP2 E:DA22 4.1 36.8 1.0 OP2 E:DG24 4.3 27.4 1.0 N7 E:DG24 4.3 33.4 1.0 ND2 A:ASN149 4.4 32.8 1.0 C8 E:DA22 4.4 29.7 1.0 N7 E:DA22 4.5 29.2 1.0 OP1 E:DG24 4.8 26.8 1.0 C8 E:DG24 4.9 31.6 1.0 O A:HOH389 4.9 27.9 1.0 O A:HOH456 5.0 49.6 1.0

J.C.Fromme, S.D.Bruner, W.Yang, M.Karplus, G.L.Verdine. Product-Assisted Catalysis in Base Excision Dna Repair Nat.Struct.Biol. V. 10 204 2003.
ISSN: ISSN 1072-8368
PubMed: 12592398
DOI: 10.1038/NSB902