Calcium in PDB 1m3h: Crystal Structure of HOGG1 D268E Mutant with Product Oligonucleotide

The structure of Crystal Structure of HOGG1 D268E Mutant with Product Oligonucleotide, PDB code: 1m3h was solved by S.J.Chung, G.L.Verdine, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	26.66 / 2.05
Space group	P 65 2 2
Cell size a, b, c (Å), α, β, γ (°)	92.345, 92.345, 211.345, 90.00, 90.00, 120.00
R / Rfree (%)	23.9 / 28.2

The binding sites of Calcium atom in the Crystal Structure of HOGG1 D268E Mutant with Product Oligonucleotide (pdb code 1m3h). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Crystal Structure of HOGG1 D268E Mutant with Product Oligonucleotide, PDB code: 1m3h:

Calcium binding site 1 out of 1 in the Crystal Structure of HOGG1 D268E Mutant with Product Oligonucleotide


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Crystal Structure of HOGG1 D268E Mutant with Product Oligonucleotide within 5.0Å range: probe atom residue distance (Å) B Occ C:Ca101 b:1.0 occ:1.00 OP2 C:DA22 3.5 71.2 1.0 OP3 D:DG24 4.1 76.6 1.0 N7 C:DA22 4.2 50.6 1.0 C8 C:DA22 4.4 51.5 1.0 N7 D:DG24 4.4 59.5 1.0 C2' C:DC21 4.5 75.8 1.0 OD1 A:ASN149 4.7 49.4 1.0 OP1 D:DG24 4.9 74.7 1.0 P C:DA22 4.9 71.7 1.0 O6 D:DG24 5.0 60.6 1.0

S.J.Chung, G.L.Verdine. Structures of End Products Resulting From Lesion Processing By A Dna Glycosylase/Lyase Chem.Biol. V. 11 1643 2004.
ISSN: ISSN 1074-5521
PubMed: 15610848
DOI: 10.1016/J.CHEMBIOL.2004.09.014