Atomistry » Calcium » PDB 1m9i-1mr8 » 1mmj
Atomistry »
  Calcium »
    PDB 1m9i-1mr8 »
      1mmj »

Calcium in PDB 1mmj: Porcine Pancreatic Elastase Complexed with A Potent Peptidyl Inhibitor, FR136706

Enzymatic activity of Porcine Pancreatic Elastase Complexed with A Potent Peptidyl Inhibitor, FR136706

All present enzymatic activity of Porcine Pancreatic Elastase Complexed with A Potent Peptidyl Inhibitor, FR136706:
3.4.21.36;

Protein crystallography data

The structure of Porcine Pancreatic Elastase Complexed with A Potent Peptidyl Inhibitor, FR136706, PDB code: 1mmj was solved by T.Kinoshita, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 51.290, 58.310, 75.520, 90.00, 90.00, 90.00
R / Rfree (%) 21.5 / 24.1

Other elements in 1mmj:

The structure of Porcine Pancreatic Elastase Complexed with A Potent Peptidyl Inhibitor, FR136706 also contains other interesting chemical elements:

Fluorine (F) 3 atoms

Calcium Binding Sites:

The binding sites of Calcium atom in the Porcine Pancreatic Elastase Complexed with A Potent Peptidyl Inhibitor, FR136706 (pdb code 1mmj). This binding sites where shown within 5.0 Angstroms radius around Calcium atom.
In total only one binding site of Calcium was determined in the Porcine Pancreatic Elastase Complexed with A Potent Peptidyl Inhibitor, FR136706, PDB code: 1mmj:

Calcium binding site 1 out of 1 in 1mmj

Go back to Calcium Binding Sites List in 1mmj
Calcium binding site 1 out of 1 in the Porcine Pancreatic Elastase Complexed with A Potent Peptidyl Inhibitor, FR136706


Mono view


Stereo pair view

A full contact list of Calcium with other atoms in the Ca binding site number 1 of Porcine Pancreatic Elastase Complexed with A Potent Peptidyl Inhibitor, FR136706 within 5.0Å range:
probe atom residue distance (Å) B Occ
N:Ca250

b:26.7
occ:1.00
O N:ASN61 2.2 14.6 1.0
O N:GLN64 2.3 17.6 1.0
O N:HOH1281 2.4 12.9 1.0
OE2 N:GLU69 2.5 16.8 1.0
OD1 N:ASP66 2.5 18.4 1.0
OE1 N:GLU59 2.6 13.0 1.0
O N:ASN63 3.3 25.1 1.0
C N:ASN61 3.4 14.8 1.0
CG N:ASP66 3.4 17.8 1.0
CD N:GLU59 3.4 12.6 1.0
CD N:GLU69 3.4 16.8 1.0
C N:GLN64 3.6 18.5 1.0
N N:ASP66 3.7 17.2 1.0
OE2 N:GLU59 3.7 11.7 1.0
CG N:GLU69 3.9 14.1 1.0
N N:ASN61 4.0 14.8 1.0
CB N:ASP66 4.0 17.1 1.0
CA N:ASN61 4.1 15.2 1.0
CA N:ASN65 4.3 18.2 1.0
CB N:ASN61 4.3 16.5 1.0
OD2 N:ASP66 4.3 15.9 1.0
N N:ASN65 4.3 17.8 1.0
C N:ASN65 4.3 18.1 1.0
CA N:ASP66 4.4 17.2 1.0
N N:LEU62 4.4 14.5 1.0
C N:ASN63 4.4 21.6 1.0
OE1 N:GLU69 4.5 16.8 1.0
C N:LEU62 4.5 19.0 1.0
CA N:LEU62 4.6 16.6 1.0
O N:LEU62 4.6 20.0 1.0
CG N:GLU59 4.6 12.4 1.0
CA N:GLN64 4.7 19.3 1.0
N N:HIS60 4.8 9.6 1.0
N N:ASN63 4.9 19.8 1.0

Reference:

T.Kinoshita, I.Nakanishi, A.Sato, T.Tada. True Interaction Mode of Porcine Pancreatic Elastase with FR136706, A Potent Peptidyl Inhibitor Bioorg.Med.Chem.Lett. V. 13 21 2003.
ISSN: ISSN 0960-894X
PubMed: 12467609
DOI: 10.1016/S0960-894X(02)00852-1
Page generated: Thu Jul 11 12:33:41 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy